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Medical Sieve Publications



2016

Elastic Functional Coding of Riemannian Trajectories
Anirudh, Rushil and Turaga, Pavan and Su, Jingyong and Srivastava, Anuj
arXiv preprint arXiv:1603.02200, 2016

Summarization and Search Over Geometric Spaces
Shroff, Nitesh and Anirudh, Rushil and Chellappa, Rama
Riemannian Computing in Computer Vision, pp. 363--387, Springer, 2016

Geometry-Based Symbolic Approximation for Fast Sequence Matching on Manifolds
Anirudh, Rushil and Turaga, Pavan
International Journal of Computer Vision 116(2), 161--173, Springer, 2016

Lung nodule detection using 3D convolutional neural networks trained on weakly labeled data
Anirudh, Rushil and Thiagarajan, Jayaraman J and Bremer, Timo and Kim, Hyojin
SPIE Medical Imaging, pp. 978532--978532, 2016

QUESTION GENERATOR
Barkan, Ella and Hashoul, Sharbell and Heilper, Andre and Kisilev, Pavel and Tzadok, Asaf and Walach, Eugene
US Patent 20,160,019,812

IMAGE REPRESENTATION SET
Barkan, Ella and Ben-horesh, Ami and Hashoul, Sharbell and Heilper, Andre and Kisilev, Pavel and Walach, Eugene
US Patent 20,160,066,891

A Cross-Modality Neural Network Transform for Semi-automatic Medical Image Annotation
Mehdi Moradi, Yufan Guo, Yaniv Gur, Mohammadreza Negahdar, and Tanveer Syeda-Mahmood
Medical Image Computing and Computer-Assisted Intervention, MICCAI 2016, pp. 300-307, Springer, LNCS Series

Identifying Patients at Risk for Aortic Stenosis Through Learning from Multimodal Data
Tanveer Syeda-Mahmood, Yufan Guo, Mehdi Moradi, D. Beymer, D. Rajan, Yu Cao, Yaniv Gur, and Mohammadreza Negahdar
Medical Image Computing and Computer-Assisted Intervention, MICCAI 2016, pp. 238-245

A hybrid learning approach for semantic labeling of cardiac CT slices and recognition of body position
Mehdi Moradi, Yaniv Gur, Hongzhi Wang, Prasanth Prasanna, Tanveer Syeda-Mahmood
2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI), pp. 1418--1421

Big Data for Medical Image Analysis: A Performance Study
Rui Zhang, Hongzhi Wang, Renu Tewari, Gero Schmidt, Deepika Kakrania
Parallel and Distributed Processing Symposium Workshops, 2016 IEEE International, pp. 1660--1664

Automatic data source identification for clinical trial eligibility criteria resolution
Chaitanya Shivade, Hebert Courtney, Regan Kelly, Eric Fosler-Lussier, Albert M Lai
Proceedings of the Annual Symposium of the American Medical Informatics Association, 2016

Identification, characterization, and grounding of gradable terms in clinical text
Chaitanya Shivade, Marie-Catherine de Marneffe, Eric Fosler-Lussier, Albert M Lai
Proceedings of BioNLP at ACL, 2016

Knowledge Driven Search Intent Mining
Ashutosh Jadhav
Ph.D. Thesis, 2016


A Quantitative and Qualitative Evaluation of Sentence Boundary Detection for the Clinical Domain
Denis Griffis, Chaitanya Shivade, Eric Fosler-Lussier, Albert M Lai
Proceedings of the Clinical Research Informatics Conference of the American Medical Informatics Association, 2016

Modeling the myxomatous mitral valve with three-dimensional echocardiography
Alison M Pouch, Benjamin M Jackson, Eric Lai, Manabu Takebe, Sijie Tian, Albert T Cheung, Y Joseph Woo, Prakash A Patel, Hongzhi Wang, Paul A Yushkevich, others
The Annals of Thoracic Surgery 102(3), 703--710, Elsevier, 2016

Tree-based transforms for privileged learning
Mehdi Moradi, Tanveer Syeda-Mahmood, Soheil Hor
Machine Learning in Medical Imaging, 2016

Lymphoma diagnosis in histopathology using a multi-stage visual learning approach
N Codella, M Moradi, M Matasar, T Syeda-Mahmood, JR Smith
SPIE Medical Imaging, pp. 97910H-97910H-7, 2016

Learning in data-limited multimodal scenarios: Scandent decision forests and tree-based features
S Hor, M Moradi
Medical Image Analysis34, 30-41, Elsevier, 2016

Medical sieve: A cognitive assistant for radiologists and cardiologists
T Syeda-Mahmood, E Walach, D Beymer, F Gilboa-Solomon, M Moradi, P Kisilev, D Kakrania, C Compas, H Wang, R Negadhar, Y Cao, T Baldwin, Y Guo, Y Gur, D Rajan, A Zlotnick, S Rabinovici-Cohen, R Ben-Ari, Amit Guy, P Prasanna, J Morey, O Boyko, S Hashoul
SPIE Medical Imaging, pp. 97850A-97850A-6, 2016

A hybrid learning approach for semantic labeling of cardiac CT slices and recognition of body position
Mehdi Moradi, Yaniv Gur, Hongzhi Wang, Prasanth Prasanna, Tanveer Syeda-Mahmood
Biomedical Imaging (ISBI), 2016 IEEE 13th International Symposium on, pp. 1418-1421


2015

A data-driven approach to prostate cancer detection from dynamic contrast enhanced MRI
Nandinee Fariah Haq, Piotr Kozlowski, Edward C Jones, Silvia D Chang, S Larry Goldenberg, Mehdi Moradi
Computerized Medical Imaging and Graphics 41(April), 37-45, Elsevier, 2015

Automated planning of breast radiotherapy using cone beam CT imaging
Guy Amit, Thomas G Purdie
Medical Physics 42(2), 770-779, AIP, 2015

Automatic learning-based beam angle selection for thoracic IMRT
Guy Amit, Thomas G Purdie, Alex Levinshtein, Andrew J Hope, Patricia Lindsay, Andrea Marshall, David A Jaffray, Vladimir Pekar
Medical Physics 42(4), 1992-2005, AIP, 2015

Automated volumetry and regional thickness analysis of hippocampal subfields and medial temporal cortical structures in mild cognitive impairment
Paul A Yushkevich, John B Pluta, Hongzhi Wang, Long Xie, Song-Lin Ding, Eske C Gertje, Lauren Mancuso, Daria Kliot, Sandhitsu R Das, David A Wolk
Human brain mapping 36(1), 258--287, Wiley Online Library, 2015

Segmentation of the Aortic Valve Apparatus in 3D Echocardiographic Images: Deformable Modeling of a Branching Medial Structure
Alison M Pouch, Sijie Tian, Manabu Takabe, Hongzhi Wang, Jiefu Yuan, Albert T Cheung, Benjamin M Jackson, Joseph H Gorman III, Robert C Gorman, Paul A Yushkevich
Statistical Atlases and Computational Models of the Heart-Imaging and Modelling Challenges, pp. 196--203, Springer, 2015

Automatic Anatomical Shape Correspondence and Alignment Using Mesh Features
Tal Darom, Yaniv Gur, Chen Hajaj, Yosi Keller
International Symposium on Biomedical Imaging (ISBI), 2015

Prostate cancer detection from model-free T1-weighted time series and diffusion imaging
Nandinee F Haq, Piotr Kozlowski, Edward C Jones, Silvia D Chang, S Larry Goldenberg, Mehdi Moradi
SPIE Medical Imaging, pp. 94142X--94142X, 2015

Multimodal classification of prostate tissue: a feasibility study on combining multiparametric MRI and ultrasound
Hussam Al-Deen Ashab, Nandinee Fariah Haq, Guy Nir, Piotr Kozlowski, Peter Black, Edward C Jones, S Larry Goldenberg, Septimiu E Salcudean, Mehdi Moradi
SPIE Medical Imaging, pp. 94141B--94141B, 2015

Ultrasound RF time series for classification of breast lesions.
Nishant Uniyal, Hani Eskandari, Purang Abolmaesumi, Samira Sojoudi, Paula Gordon, Linda Warren, R Rohling, S Salcudean, Mehdi Moradi
IEEE Transactions on Medical Imaging 34(2), 652-661, IEEE , 2015

Characterization of aggressive prostate cancer using ultrasound RF time series
Amir Khojaste, Farhad Imani, Mehdi Moradi, David Berman, D Robert Siemens, Eric E Sauerberi, Alexander H Boag, Purang Abolmaesumi, Parvin Mousavi
SPIE Medical Imaging, pp. 94141A--94141A, 2015

Augmenting MRI--transrectal ultrasound-guided prostate biopsy with temporal ultrasound data: a clinical feasibility study
Farhad Imani, Bo Zhuang, Amir Tahmasebi, Jin Tae Kwak, Sheng Xu, Harsh Agarwal, Shyam Bharat, Nishant Uniyal, Ismail Baris Turkbey, Peter Choyke, others
International journal of computer assisted radiology and surgery, 1--9, Springer, 2015

A generalized framework for medical image classification and recognition
M. Abedini, N. C. F. Codella, J. H. Connell, R. Garnavi, M. Merler, S. Pankanti, J. R. Smith, T. Syeda-Mahmood
IBM Journal of Research and Development 59(2/3), 1:1-1:18, 2015

Automatic Dual-View Mass Detection in Full-Field Digital Mammograms
Guy Amit, Sharbell Hashoul, Pavel Kisilev, Boaz Ophir, Eugene Walach, Aviad Zlotnick
Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 9350, 44-52, Springer

MRI reconstruction of multi-image acquisitions using a rank regularizer with data reordering
Ganesh Adluru, Yaniv Gur, Liyong Chen, David Feinberg, Jeffrey Anderson, and Edward V. R. DiBella
Medical Physics42, 4734 - 4744, 2015

Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use?
Lipeng Ning, Frederik Laun, Yaniv Gur, Edward VR DiBella et al.
Medical Image Analysis26, 316-331, 2015

Cross-domain Recognition by Identifying Compact Joint Subspace
Y. Lin, J. Chen, Y. Cao, Y. Zhou, L. Zhang, S. Wang.
ICIP, 2015

Finding a Path for Segmentation through Sequential Learning
H. Wang, Y. Cao, T. Syeda-Mahmood
IPMI, 2015

An Experimental Study on Combining the Auto-context Model with Corrective Learning for Canine Leg Muscle Segmentation
H. Wang, Y. Cao, T. Syeda-Mahmood
ISBI, 2015

Fracture Detection in X-ray Images Through Stacked Random Forests Feature Fusion
Y. Cao, H. Wang, M. Moradi, P. Prasanna, T. Syeda-Mahmood
ISBI, 2015

Optimal-Mass-Transfer-Based Estimation of Glymphatic transport in Living Brain
Ratner, V., Zhu, L., Kolesov, I., Nedergaard, M., Benveniste, H., Tannenbaum, A.
SPIE 2015

Surface-based registration of liver in ultrasound and CT
Ehsan Dehghan, Kongkuo Lu, Pingkun Yan, Amir Tahmasebi, Sheng Xu, Bradford J Wood, Nadine Abi-Jaoudeh, Aradhana Venkatesan, Jochen Kruecker
SPIE Medical Imaging, pp. 941522--941522, 2015

Elastic functional coding of human actions: from vector-fields to latent variables
Anirudh, Rushil and Turaga, Pavan and Su, Jingyong and Srivastava, Anuj
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 3147--3155, 2015

Towards realtime measurement of connectedness in human movement
Krzyzaniak, Michael and Anirudh, Rushil and Venkataraman, Vinay and Turaga, Pavan and Wei, Sha Xin
Proceedings of the 2nd International Workshop on Movement and Computing, pp. 120--123, 2015

A Generalized Lyapunov Feature for Dynamical Systems on Riemannian Manifolds
Anirudh, Rushil and Venkataraman, Vinay and Turaga, Pavan
BMVC Workshops, 2015

Efficient verification or disambiguation of character recognition results
Barkan, Ella and Toshinari, Itoko and Tzadok, Asaf
US Patent 9,008,428

AUTOMATIC GENERATION OF SEMANTIC DESCRIPTION OF VISUAL FINDINGS IN MEDICAL IMAGES
Kisilev, Pavel and Walach, Eugene and Barkan, Ella and Hashoul, Sharbell
US Patent 20,150,332,111

Viewpoint Recognition in Cardiac CT Images
Mehdi Moradi, Noel C Codella, Tanveer Syeda-Mahmood
Functional Imaging and Modeling of the Heart (FIMH 2015), LNCS 9126, pp. 180-188, Springer

Semantic Description of Medical Image Findings: Structured Learning Approach
Kisilev, Pavel and Walach, Eugene and Hashoul, Sharbell and Barkan, Ella and Ophir, Boaz and Alpert, Sharon
2015

Scandent Tree: A Random Forest Learning Method for Incomplete Multimodal Datasets
S Hor, M Moradi
Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015, , pp. 694-701

Finding a Path for Segmentation Through Sequential Learning
Hongzhi Wang, Yu Cao, Tanveer F Syed-Mahmood
International Conference on Information Processing in Medical Imaging, pp. 488--500, 2015

Medially constrained deformable modeling for segmentation of branching medial structures: Application to aortic valve segmentation and morphometry
Alison M Pouch, Sijie Tian, Manabu Takebe, Jiefu Yuan, Robert Gorman, Albert T Cheung, Hongzhi Wang, Benjamin M Jackson, Joseph H Gorman, Robert C Gorman, others
Medical image analysis 26(1), 217--231, Elsevier, 2015

Assessing atrophy measurement techniques in dementia: Results from the MIRIAD atrophy challenge
David M Cash, Chris Frost, Leonardo O Iheme, Devrim \"Unay, Melek Kandemir, Jurgen Fripp, Olivier Salvado, Pierrick Bourgeat, Martin Reuter, Bruce Fischl, others
NeuroImage123, 149--164, Elsevier, 2015

Corpus-based discovery of semantic intensity scales
Chaitanya Shivade, Marie-Catherine de Marneffe, Eric Fosler-Lussier, Albert Lai
In Proceedings of NAACL-HTL, 2015

Extending NegEx with Kernel Methods for Negation Detection in Clinical Text
Chaitanya Shivade, Marie-Catherine de Marneffe, Eric Fosler-Lussier, Albert M Lai
Proceedings of the Workshop on Extra-Propositional Aspects of Meaning at NAACL-HLT, 2015

Fracture detection in x-ray images through stacked random forests feature fusion
Yu Cao, Hongzhi Wang, Mehdi Moradi, Prasanth Prasanna, Tanveer F Syeda-Mahmood
2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), pp. 801--805

An experimental study on combining the auto-context model with corrective learning for canine LEG muscle segmentation
Hongzhi Wang, Yu Cao, Tanveer Syeda-Mahmood
2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), pp. 1106--1109

Comparison of UMLS terminologies to identify risk of heart disease using clinical notes
Chaitanya Shivade, Pranav Malewadkar, Eric Fosler-Lussier, Albert M Lai
Journal of Biomedical Informatics58, S103--S110, 2015

Textual inference for eligibility criteria resolution in clinical trials
Chaitanya Shivade, Courtney Hebert, Marcelo Lopetegui, Marie-Catherine de Marneffe, Eric Fosler-Lussier, Albert M Lai
Journal of Biomedical Informatics, 2015

Multi-atlas based segmentation of multiple organs in breast MRI
Xi Liang, Suman Sedai, Hongzhi Wang, Sisi Liang, Naveed Hashmi, Patrick Mcneillie, Sharbell Hashoul
SPIE Medical Imaging, pp. 94133R--94133R, 2015

Multi-atlas label fusion with augmented atlases for fast and accurate segmentation of cardiac MR images
Long Xie, Suman Sedai, Xi Liang, Colin B Compas, Hongzhi Wang, Paul A Yushkevich, Tanveer Syeda-Mahmood
2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), pp. 376--379

Ultrasound-Based Detection of Prostate Cancer Using Automatic Feature Selection with Deep Belief Networks
Shekoofeh Azizi, Farhad Imani, Bo Zhuang, Amir Tahmasebi, Jin Tae Kwak, Sheng Xu, Nishant Uniyal, Baris Turkbey, Peter Choyke, Peter Pinto, Bradford Wood, Mehdi Moradi, Parvin Mousavi, Purang Abolmaesumi
Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015, pp. 70-77


2014

Multiparametric 3D in vivo ultrasound vibroelastography imaging of prostate cancer: Preliminary results
Mehdi Moradi, S Sara Mahdavi, Guy Nir, Omid Mohareri, Anthony Koupparis, Louis-Olivier Gagnon, Ladan Fazli, Rowan G Casey, Joseph Ischia, Edward C Jones, others
Medical physics 41(7), 073505, American Association of Physicists in Medicine, 2014

Improved parameter extraction and classification for dynamic contrast enhanced MRI of prostate
Nandinee Fariah Haq, Piotr Kozlowski, Edward C Jones, Silvia D Chang, S Larry Goldenberg, Mehdi Moradi
SPIE Medical Imaging, pp. 903511--903511, 2014

Towards enabling ultrasound guidance in cervical cancer high-dose-rate brachytherapy
Adrian Wong, Samira Sojoudia, Marc Gaudet, Wan Wan Yap, Silvia D Chang, Purang Abolmaesumi, Christina Aquino-Parsons, Mehdi Moradi
SPIE Medical Imaging, pp. 90361Q--90361Q, 2014

A preliminary study on the effect of motion correction on HARDI reconstruction
Shireen Elhabian, Yaniv Gur, Clement Vachet, Joseph Piven, Martin Styner, Ilana Leppert, G Bruce Pike, Guido Gerig
Biomedical Imaging (ISBI), 2014 IEEE 11th International Symposium on, pp. 1055--1058

Generalized HARDI Invariants by Method of Tensor Contraction
Yaniv Gur, Chris R Johnson
International Symposium on Biomedical Imaging (ISBI), 2014

Motion is Inevitable: The Impact of Motion Correction Schemes on HARDI Reconstructions
S. Elhabian, Y. Gur, J. Piven, M. Styner, I. Leppert, G. Bruce Pike, G. Gerig
Computational Diffusion MRI (CDMRI), 2014

Assessment of white matter microstructure in stroke patients using NODDI
Ganesh Adluru, Yaniv Gur, Jeffrey Anderson, Lorie Richards, Nagesh Adluru, Edward DiBella
EMBC, 2014

Multi-parametric 3D Quantitative Ultrasound Vibro-Elastography Imaging for Detecting Palpable Prostate Tumors
Omid Mohareri, Angelica Ruszkowski, Julio Lobo, Joseph Ischia, Ali Baghani, Guy Nir, Hani Eskandari, Edward Jones, Ladan Fazli, Larry Goldenberg, others
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2014, pp. 561--568, Springer

Solutions for Missing Parameters in Computer-Aided Diagnosis with Multiparametric Imaging Data
Hussam Al-Deen Ashab, Piotr Kozlowski, S Larry Goldenberg, Mehdi Moradi
Machine Learning in Medical Imaging, pp. 289--296, Springer, 2014

Quantifying Tikhonov Regularization Uncertainty in the Inverse Problem of Electrocardiography
Jessie J France, Yaniv Gur, Robert M Kirby and Chris R Johnson
Computing in Cardiology, 2014

Improved apparatus for predictive diagnosis of rotator cuff disease
Anup Pillai, Brittany N Hall, Charles A Thigpen, David M Kwartowitz
SPIE Medical Imaging, pp. 904005--904005, 2014

Ameliorating mammograms by using novel image processing algorithms
A Pillai, D Kwartowitz
SPIE Medical Imaging, pp. 90381H--90381H, 2014

Hetero-structure pin solar cell with high efficiency
S Mil'shtein, A Pillai, DP Nair, A Karumuri
7TH INTERNATIONAL CONFERENCE ON LOW DIMENSIONAL STRUCTURES AND DEVICES:(LDSD 2011), pp. 175--177, 2014

Selective pin photodetector with resonant tunneling
S Mil'shtein, S Wilson, A Pillai
7TH INTERNATIONAL CONFERENCE ON LOW DIMENSIONAL STRUCTURES AND DEVICES:(LDSD 2011), pp. 181--184, 2014

Circumferential contact-less line scanning of biometric objects
Samson Mil'shtein, John Palma, Christopher Liessner, Michael Baier, Anup Pillai, Ameya Shendye
US Patent 8,737,698

Quantifying QRS changes during myocardial ischemia: Insights from high frequency electrocardiography
Guy Amit, Yair Granot, Shimon Abboud
Journal of Electrocardiology 47(4), 505-511, Elsevier, 2014


Automatic learning-based selection of beam angles in radiation therapy of lung cancer
Guy Amit, Thomas G Purdie, Alex Levinshtein, Andrew J Hope, Patricia Lindsay, David A Jaffray, Vladimir Pekar
11th IEEE International Symposium on Biomedical Imaging (ISBI), pp. 230--233, 2014

Automatic Clustering and Thickness Measurement of Anatomical Variants of the Human Perirhinal Cortex
Long Xie, John Pluta, Hongzhi Wang, Sandhitsu R Das, Lauren Mancuso, Dasha Kliot, Brian B Avants, Song-Lin Ding, David A Wolk, Paul A Yushkevich
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2014, pp. 81--88, Springer

Fully automatic segmentation of the mitral leaflets in 3D transesophageal echocardiographic images using multi-atlas joint label fusion and deformable medial modeling
Alison M Pouch, Hongzhi Wang, Manabu Takabe, Benjamin M Jackson, JH Gorman, Robert C Gorman, Paul A Yushkevich, Chandra M Sehgal
Medical image analysis 18(1), 118--129, Elsevier, 2014

Multi-atlas Segmentation with Learning-Based Label Fusion

Mahmood - Machine Learning in Medical ..., 2014 - Springer

Segmentation of anatomical structures in four-chamber view echocardiogram images

Mahmood - ... Recognition (ICPR), 2014 ..., 2014 - ieeexplore.ieee.org

Edge-Weighted Centroid Voronoi Tessellation with Propagation of Consistency Constraint for 3D Grain Segmentation in Microscopic Superalloy Images
Youjie Zhou, Lili Ju, Yu Cao, Jarrell Waggoner, Yuewei Lin, Jeff Simmons, Song Wang
Computer Vision and Pattern Recognition Workshops (CVPRW), 2014 IEEE Conference on, pp. 258--265

Chronological classification of ancient paintings using appearance and shape features
Qin Zou, Yu Cao, Qingquan Li, Chuanhe Huang, Song Wang
Pattern Recognition Letters49, 146--154, Elsevier, 2014

Automatic inpainting by removing fence-like structures in RGBD images
Qin Zou, Yu Cao, Qingquan Li, Qingzhou Mao, Song Wang
Machine Vision and Applications 25(7), 1841--1858, Springer, 2014

Anatomical Structure Labeling in Apical Four-Chamber View Echocardiogram Images
Yu Cao, Colin Compas, Hongzhi Wang, Tanveer Syeda-Mahmood
Computing in Cardiology, 2014

Ultrasound-Based Predication of Prostate Cancer in MRI-guided Biopsy
Nishant Uniyal, Farhad Imani, Amir Tahmasebi, Harsh Agarwal, Shyam Bharat, Pingkun Yan, Jochen Kruecker, Jin Tae Kwak, Sheng Xu, Bradford Wood, others
Clinical Image-Based Procedures. Translational Research in Medical Imaging, pp. 142--150, Springer, 2014

Discriminating normal and abnormal left ventricular shapes in four-chamber view 2D echocardiography
T. Syeda-Mahmood, Wang, Quan ; McNeillie, Patrick ; Beymer, David ; Compas, Colin
Proc. ISBI 2014

Electromagnetic tracking for catheter reconstruction in ultrasound-guided high-dose-rate brachytherapy of the prostate
Shyam Bharat, Cynthia Kung, Ehsan Dehghan, Ananth Ravi, Niranjan Venugopal, Antonio Bonillas, Doug Stanton, Jochen Kruecker
Brachytherapy 13(6), 640--650, Elsevier, 2014

Ultrasound-Fluoroscopy Registration for Intraoperative Dynamic Dosimetry in Prostate Brachytherapy
Ehsan Dehghan, Nathanael Kuo, Anton Deguet, Yi Le, Elwood Armour, E Clif Burdette, Danny Y Song, Gabor Fichtinger, Jerry L Prince, Junghoon Lee
Abdomen and Thoracic Imaging, pp. 587--621, Springer US, 2014

An image-guidance system for dynamic dose calculation in prostate brachytherapy using ultrasound and fluoroscopy
Nathanael Kuo, Ehsan Dehghan, Anton Deguet, Omar Y Mian, Yi Le, E Clif Burdette, Gabor Fichtinger, Jerry L Prince, Danny Y Song, Junghoon Lee
Medical Physics 41(9), 091712, American Association of Physicists in Medicine, 2014

SU-D-BRF-07: Ultrasound and Fluoroscopy Based Intraoperative Image-Guidance System for Dynamic Dosimetry in Prostate Brachytherapy
N Kuo, E Dehghan, Y Le, A Deguet, E Burdette, G Fichtinger, J Prince, D Song, J Lee
Medical Physics 41(6), 116--116, American Association of Physicists in Medicine, 2014

Electromagnetic Catheter Digitization in Prostate High-Dose-Rate Brachytherapy Treatment Planning
Alexandru M Nicolae, Shyam Bharat, Cynthia Kung, Niranjan Venugopal, Ehsan Dehghan, Antonio Bonillas, Doug Stanton, Jochen Kruecker, Ananth Ravi
Brachytherapy pp. 13, S41, 2014

Intraoperative segmentation of iodine and palladium radioactive sources in C-arm images
Chiara Amat di San Filippo, Gabor Fichtinger, William James Morris, Septimiu E Salcudean, Ehsan Dehghan, Pascal Fallavollita
International journal of computer assisted radiology and surgery 9(5), 769--776, Springer Berlin Heidelberg, 2014

OR47 Presentation Time: 9: 57 AM Electromagnetic Catheter Digitization in Prostate High-Dose-Rate Brachytherapy Treatment Planning Alexandru M. Nicolae, BSc, Shyam Bharat, PhD 2, Cynthia Kung, MSc 2
Niranjan Venugopal, Ehsan Dehghan, Antonio Bonillas, Current Ultrasound-based Intraoperative Dosimetry, Omar Y Mian, Yi Le, Adam Robinson, Jerry L Prince, Junghoon Lee, Danny Y Song
Abstracts/Brachytherapy13, S15eS126, 2014

Miniature contactless fingerprinting device
Sam Mil'shtein, Chris Leger, Anup Pillai, Zachary Durkee, Shiv D Sharma
US Patent App. 14/538,182

Hetero-structure pinip solar cell with virtual collector
R Kwende, A Pillai, S Mil'shtein
7TH INTERNATIONAL CONFERENCE ON LOW DIMENSIONAL STRUCTURES AND DEVICES:(LDSD 2011), pp. 178--180, 2014

Self-contained Information Retention Format for Future Semantic Interoperability
Simona Rabinovici-Cohen, Roger Cummings, Sam Fineberg
Proceedings of the 4th International Workshop on Semantic Digital Archives (SDA), 2014

Storlet engine: performing computations in cloud storage
S Rabinovici-Cohen, E Henis, J Marberg, K Nagin
IBM Technical Report H-0320, 2014

Storlet Engine for Executing Biomedical Processes Within the Storage System
Simona Rabinovici-Cohen, Ealan A. Henis, John Marberg, Kenneth Nagin
Proceedings of the 7th International Workshop on Process-oriented Information Systems in Healthcare (ProHealth), 2014

Interactively test driving an object detector: Estimating performance on unlabeled data
Anirudh, Rushil and Turaga, Pavan
Applications of Computer Vision (WACV), 2014 IEEE Winter Conference on, pp. 175--182

Analysis of online information searching for cardiovascular diseases on a consumer health information portal
Ashutosh Jadhav, Amit Sheth, Jyotishman Pathak
AMIA Annual Symposium Proceedings, pp. 739, 2014

Twitris: A system for collective social intelligence
Amit Sheth, Ashutosh Jadhav, Pavan Kapanipathi, Chen Lu, Hemant Purohit, Gary Alan Smith, Wenbo Wang
Encyclopedia of Social Network Analysis and Mining, pp. 2240--2253, Springer, 2014

Precise medication extraction using agile text mining
Chaitanya Shivade, James Cormack, David Milward
Proceedings of the 5th International Workshop on Health Text Mining and Information Analysis (Louhi) at EACL, pp. 75--79, 2014

Diagnosis-specific readmission risk prediction using electronic health data: a retrospective cohort study
Courtney Hebert, Chaitanya Shivade, Randi Foraker, Jared Wasserman, Caryn Roth, Hagop Mekhjian, Stanley Lemeshow, Peter Embi
BMC Medical Informatics and Decision Making 14(1), 1, 2014

A review of approaches to identifying patient phenotype cohorts using electronic health records
Chaitanya Shivade, Preethi Raghavan, Eric Fosler-Lussier, Peter J Embi, Noemie Elhadad, Stephen B Johnson, Albert M Lai
Journal of the American Medical Informatics Association 21(2), 221--230, 2014

An Analysis of Mayo Clinic Search Query Logs for Cardiovascular Diseases
Ashutosh Jadhav, Amit P Sheth, Jyotishman Pathak
American Medical Informatics Association (AMIA Annual Symposium , 2014

What Information about Cardiovascular Diseases do People Search Online?
Ashutosh Sopan Jadhav, Stephen Wu, Amit P Sheth, Jyotishman Pathak
25th European Medical Informatics Conference (MIE), 2014

Comparative Analysis of Online Health Information Search by Device Type
Ashutosh Jadhav, Jyotishman Pathak
American Medical Informatics Association AMIA, TBI/CRI Joint Summit, 2014

Empowering personalized medicine with big data and semantic web technology: promises, challenges, and use cases
Maryam Panahiazar, Vahid Taslimitehrani, Ashutosh Jadhav, Jyotishman Pathak
Big Data (Big Data), 2014 IEEE International Conference on, pp. 790--795

Social Health Signals
Ashutosh Sopan Jadhav, Swapnil Soni, Amit P Sheth
Knoesis Technical Report, 2014

Online Information Seeking for Cardiovascular Diseases: A Case Study from Mayo Clinic
Ashutosh Jadhav, Stephen Wu, Amit Sheth, Jyotishman Pathak
25th European Medical Informatics Conference (MIE) , pp. 702, 2014

Evaluating the process of online health information searching: a qualitative approach to exploring consumer perspectives
Alexander S Fiksdal, Ashok Kumbamu, Ashutosh S Jadhav, Cristian Cocos, Laurie A Nelsen, Jyotishman Pathak, Jennifer B McCormick
Journal of medical Internet research 16(10), e224, JMIR Publications Inc., Toronto, Canada, 2014

Unsupervised detection of abnormalities in medical images using salient features
S Alpert, P Kisilev
SPIE Medical Imaging, 903416-903416-6, 2014

Comparative analysis of online health queries originating from personal computers and smart devices on a consumer health information portal
Ashutosh Jadhav, Donna Andrews, Alexander Fiksdal, Ashok Kumbamu, Jennifer B McCormick, Andrew Misitano, Laurie Nelsen, Euijung Ryu, Amit Sheth, Stephen Wu, others
Journal of medical Internet research 16(7), e160, JMIR Publications Inc., Toronto, Canada, 2014


2013

Ultrasound RF time series for tissue typing: first in vivo clinical results
Mehdi Moradi, S Sara Mahdavi, Guy Nir, Edward C Jones, S Larry Goldenberg, Septimiu E Salcudean
SPIE Medical Imaging, pp. 86701I--86701I, 2013

Department of Electrical and Computer Engineering, University of British Columbia, Vancouver, Canada
Nishant Uniyal, Hani Eskandari, Purang Abolmaesumi, Samira Sojoudi, Paula Gordon, Linda Warren, Robert N Rohling, Septimiu E Salcudean, Mehdi Moradi
Ultrasonics Symposium (IUS), 2013 IEEE International, pp. 96--99

Statistical unit root test for edge detection in ultrasound images of vessels and cysts
Mehdi Moradi, S Sara Mahdavi, Julian Guerrero, Robert Rohling, Septimiu E Salcudean
Journal of Electronic Imaging 22(3), 033013--033013, International Society for Optics and Photonics, 2013

Model selection and estimation of multi-compartment models in diffusion mri with a rician noise model
Xinghua Zhu, Yaniv Gur, Wenping Wang, P Thomas Fletcher
Information Processing in Medical Imaging (IPMI), pp. 644--655, 2013

Graph Diffusion Distance: A Difference Measure for Weighted Graphs Based on the Graph Laplacian Exponential Kernel
DK Hammond, Y Gur, CR Johnson
Global Conference on Signal and Information Processing (GlobalSIP), 2013

Quantitative comparison of reconstruction methods for intra-voxel fiber recovery from diffusion MRI
Alessandro Daducci, E Canales-Rodriguez, Maxime Descoteaux, Y Gur, M Mani, et al.
IEEE Transactions on Medical Imaging (TMI), IEEE, 2013

Design of cascaded low cost solar cell with CuO substrate
Pillai Anup, Sharma Shiv, Yessayan Garo, others
THE PHYSICS OF SEMICONDUCTORS: Proceedings of the 31st International Conference on the Physics of Semiconductors (ICPS) 2012, pp. 518--519, 2013

Multi-Atlas Segmentation with Joint Label Fusion
H. Wang, J. W. Suh, S. Das, J. Pluta, C. Craige and P. Yushkevich
PAMI 35(3), 611-623, IEEE, 2013

Groupwise segmentation with multi-atlas joint label fusion
Hongzhi Wang, Paul A Yushkevich
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2013, pp. 711--718, Springer

Multi-atlas Segmentation without Registration: A Supervoxel-Based Approach
Hongzhi Wang, Paul A Yushkevich
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2013, pp. 535--542, Springer

Automated segmentation and geometrical modeling of the tricuspid aortic valve in 3D echocardiographic images
Alison M Pouch, Hongzhi Wang, Manabu Takabe, Benjamin M Jackson, Chandra M Sehgal, Joseph H Gorman III, Robert C Gorman, Paul A Yushkevich
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2013, pp. 485--492, Springer

Multi-atlas segmentation with robust label transfer and label fusion
Hongzhi Wang, Alison Pouch, Manabu Takabe, Benjamin Jackson, Joseph Gorman, Robert Gorman, Paul A Yushkevich
Information Processing in Medical Imaging, pp. 548--559, 2013

Multi-Atlas Segmentation with Joint Label Fusion-A Open Source Implementation
Hongzhi Wang, Paul Yushkevich
Frontiers in Neuroinformatics, 0, Frontiers, 2013

High-frequency QRS analysis improves the specificity of exercise ECG testing in women referred for angiography
David Rosenmann, Yaakov Mogilevski, Guy Amit, Linda R Davrath, Dan Tzivoni
Journal of Electrocardiology 46(1), 19--26, Elsevier, 2013

The cost-effectiveness of stress testing using high-frequency QRS analysis
Guy Amit, Yizhar Toren, Linda R Davrath, Eran Toledo, Shimon Abboud
International Journal of Medical Engineering and Informatics 5(1), 68--80, Inderscience, 2013

Recognizing human activities from partially observed videos
Yu Cao, Daniel Barrett, Andrei Barbu, Siddharth Narayanaswamy, Haonan Yu, Aaron Michaux, Yuewei Lin, Sven Dickinson, Jeffrey Mark Siskind, Song Wang
Computer Vision and Pattern Recognition (CVPR), 2013 IEEE Conference on, pp. 2658--2665


Motion analysis for human interaction detection using optical flow on lattice superpixels
Peng Zheng, Yu Cao, Song Wang
Wuhan University Journal of Natural Sciences 18(2), 109--116, Springer, 2013

3D Superalloy Grain Segmentation Using a Multichannel Edge-Weighted Centroidal Voronoi Tessellation Algorithm
Yu Cao, Lili Ju, Youjie Zhou, Song Wang
Image Processing, IEEE Transactions on 22(10), 4123--4135, IEEE, 2013



Stable Denoising-Enhancement of Images by Telegraph-Diffusion Operators
Ratner, V., Zeevi, Y. Y.
ICIP 2013

A dynamic dosimetry system for prostate brachytherapy
Nathanael Kuo, Ehsan Dehghan, Anton Deguet, Danny Y Song, Jerry L Prince, Junghoon Lee
SPIE Medical Imaging, pp. 867109--867109, 2013

Declustering n-Connected Components for Segmentation of Iodine Implants in C-Arm Fluoroscopy Images
Chiara Amat di San Filippo, Gabor Fichtinger, William James Morris, Septimiu E Salcudean, Ehsan Dehghan, Pascal Fallavollita
Information Processing in Computer-Assisted Interventions, pp. 101--110, Springer Berlin Heidelberg, 2013

A heterogeneous dictionary model for representation and recognition of human actions
Anirudh, Rushil and Ramamurthy, Karthikeyan and Thiagarajan, Jayaraman J and Turaga, Pavan and Spanias, Andreas
Acoustics, Speech and Signal Processing (ICASSP), 2013 IEEE International Conference on, pp. 3472--3476

Context-aware information item recommendations for deals
Ashutosh Sopan Jadhav, Hamid Motahari, Susan D Spence, Claudio Bartolini
US Patent App. 13/750,187

PSAR: Predictive Space Aggregated Regression and Its Application in Valvular Heart Disease Classification
Chen Ting, Ritwik Kumar, Guillaume Axel Troianowski, Tanveer Syeda-Mahmood, David Beymer & Karen Brannon
IEEE International Symposium on Biomedical Imaging, pp. 1122--1125, 2013

Multiple Kernel Completion and Its Application to Cardiac Disease Discrimination
Ritwik Kumar, Chen Ting, Moritz Hardt, David Beymer, Karen Brannon & Tanveer Syeda-Mahmood
IEEE International Symposium on Biomedical Imaging, pp. 764--767, 2013

Taming Complex Healthcare Data Models with Dictionary Tooling
John T. E. Timm, Joshua Hui, Sarah Knoop, and Peter Schwarz,
Proceedings of 5th International Workshop on Software Engineering in Health Care (SEHC), 2013
Abstract

Phenotype Detection in Morphological Mutant Mice Using Deformation Features
Roy, Sharmili and Liang, Xi and Kitamoto, Asanobu and Tamura, Masaru and Shiroishi, Toshihiko and Brown, Michael S Brown
Medical Image Computing and Computer-Assisted Intervention--MICCAI, pp. 437-444, 2013


Similarity retrieval of angiogram images BASED on a flexible shape model
Tanveer Syeda-Mahmood, Colin B Compas, David Beymer, Ritwik Kumar
Functional Imaging and Modeling of the Heart, pp. 97--105, Springer, 2013


2012

Seed localization in ultrasound and registration to C-arm fluoroscopy using matched needle tracks for prostate brachytherapy
Mehdi Moradi, Seyedeh Sara Mahdavi, Ehsan Dehghan, Julio R Lobo, Sanchit Deshmukh, William James Morris, Gabor Fichtinger, Septimiu E Salcudean
Biomedical Engineering, IEEE Transactions on 59(9), 2558--2567, IEEE, 2012

Two solutions for registration of ultrasound to MRI for image-guided prostate interventions
Mehdi Moradi, Firdaus Janoos, Andriy Fedorov, Petter Risholm, Tina Kapur, Luciant D Wolfsberger, Paul L Nguyen, Clare M Tempany, William M Wells
Engineering in Medicine and Biology Society (EMBC), 2012 Annual International Conference of the IEEE, pp. 1129--1132


Use of Needle Track Detection to Quantify the Displacement of Stranded Seeds Following Prostate Brachytherapy
Julio R Lobo, Mehdi Moradi, Nick Chng, Ehsan Dehghan, William J Morris, Gabor Fichtinger, Septimiu E Salcudean
Medical Imaging, IEEE Transactions on 31(3), 738--748, IEEE, 2012

MRI Confirmed Prostate Tissue Classification with Laplacian Eigenmaps of Ultrasound RF Spectra
Mehdi Moradi, Christian Wachinger, Andriy Fedorov, William M Wells, Tina Kapur, Luciant D Wolfsberger, Paul Nguyen, Clare M Tempany
Machine Learning in Medical Imaging, pp. 19--26, Springer, 2012

Uncertainty visualization in HARDI based on ensembles of ODFs
Fangxiang Jiao, Jeff M Phillips, Yaniv Gur, Chris R Johnson
Pacific Visualization Symposium (PacificVis), 2012 IEEE, pp. 193--200

White matter structure assessment from reduced HARDI data using low-rank polynomial approximations
Yaniv Gur, Fangxiang Jiao, Stella Xinghua Zhu, Chris R Johnson
Medical image computing and computer-assisted intervention: MICCAI... International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 186, 2012

SPD tensors regularization via Iwasawa decomposition
Yaniv Gur, Ofer Pasternak, Nir Sochen
Mathematical Methods for Signal and Image Analysis and Representation, pp. 83--100, Springer, 2012

Can contactless fingerprints be compared to existing database?
Anup Pillai, Sam Mil'shtein
Homeland Security (HST), 2012 IEEE Conference on Technologies for, pp. 390--394

Measuring longitudinal change in the hippocampal formation from in vivo high-resolution T2-weighted MRI
Sandhitsu R Das, Brian B Avants, John Pluta, Hongzhi Wang, Jung W Suh, Michael W Weiner, Susanne G Mueller, Paul A Yushkevich
Neuroimage 60(2), 1266--1279, Elsevier, 2012

Spatial bias in multi-atlas based segmentation
Hongzhi Wang, Paul A Yushkevich
Computer Vision and Pattern Recognition (CVPR), 2012 IEEE Conference on, pp. 909--916

From label fusion to correspondence fusion: a new approach to unbiased groupwise registration
Paul A Yushkevich, Hongzhi Wang, John Pluta, Brian B Avants
Computer Vision and Pattern Recognition (CVPR), 2012 IEEE Conference on, pp. 956--963

Reconstruction of the human hippocampus in 3D from histology and high-resolution ex-vivo MRI
Daniel H Adler, Alex Yang Liu, John Pluta, Salmon Kadivar, Sylvia Orozco, Hongzhi Wang, James C Gee, Brian B Avants, Paul A Yushkevich
Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on, pp. 294--297

Dependency prior for multi-atlas label fusion
Hongzhi Wang, Paul A Yushkevich
Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on, pp. 892--895

Guiding automatic segmentation with multiple manual segmentations
Hongzhi Wang, Paul A Yushkevich
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2012, pp. 429--436, Springer

Fully automatic segmentation of the open mitral leaflets in 3D transesophageal echocardiographic images using multi-atlas label fusion and deformable medial modeling
Alison M Pouch, Hongzhi Wang, Paul A Yushkevich, Manabu Takabe, Benjamin M Jackson, Joseph H Gorman, Robert C Gorman, Chandra M Sehgal
Ultrasonics Symposium (IUS), 2012 IEEE International, pp. 220--223

Brain parcellation aids in electrode localization in epileptic patients
Jue Wu, Kathryn Davis, Allan Azarion, Yuanjie Zheng, Hongzhi Wang, Brian Litt, James Gee
Augmented Environments for Computer-Assisted Interventions, pp. 130--137, Springer, 2012

Robust automated amygdala segmentation via multi-atlas diffeomorphic registration
Jamie L Hanson, Jung W Suh, Brendon M Nacewicz, Matthew J Sutterer, Amelia A Cayo, Diane E Stodola, Cory A Burghy, Hongzhi Wang, Brian B Avants, Paul A Yushkevich, others
Frontiers in neuroscience6, Frontiers Media SA, 2012

CrackTree: Automatic crack detection from pavement images
Qin Zou, Yu Cao, Qingquan Li, Qingzhou Mao, Song Wang
Pattern Recognition Letters 33(3), 227--238, Elsevier, 2012

Superedge grouping for object localization by combining appearance and shape information
Zhiqi Zhang, Sanja Fidler, Jarrell Waggoner, Yu Cao, Sven Dickinson, Jeffrey Mark Siskind, Song Wang
Computer Vision and Pattern Recognition (CVPR), 2012 IEEE Conference on, pp. 3266--3273

Grain segmentation of 3D superalloy images using multichannel EWCVT under human annotation constraints
Yu Cao, Lili Ju, Song Wang
Computer Vision--ECCV 2012, pp. 244--257, Springer

An adaptive method of tracking anatomical curves in X-ray sequences
Yu Cao, Peng Wang
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2012, pp. 173--180, Springer

Ultrasound--fluoroscopy registration for prostate brachytherapy dosimetry
Ehsan Dehghan, Junghoon Lee, Pascal Fallavollita, Nathanael Kuo, Anton Deguet, Yi Le, E Clif Burdette, Danny Y Song, Jerry L Prince, Gabor Fichtinger
Medical image analysis 16(7), 1347--1358, Elsevier, 2012

Seed localization in ultrasound and registration to C-arm fluoroscopy using matched needle tracks for prostate brachytherapy.
Mehdi Moradi, S Mahdavi, Ehsan Dehghan, J Lobo, Sanchit Deshmukh, W Morris, Gabor Fichtinger, Septimiu E Salcudean
IEEE Transactions on Biomedical Engineering, 2012

Segmentation of iodine brachytherapy implants in fluoroscopy
Eric Moult, Gabor Fichtinger, W James Morris, Septimiu E Salcudean, Ehsan Dehghan, Pascal Fallavollita
International journal of computer assisted radiology and surgery 7(6), 871--879, Springer-Verlag, 2012



Twitris+: Social media analytics platform for effective coordination
Gary Alan Smith, Amit P Sheth, Ashutosh Sopan Jadhav, Hemant Purohit, Lu Chen, Michael Cooney, Pavan Kapanipathi, Pramod Anantharam, Pramod Koneru, Wenbo Wang
National Science Foundation (NSF) SoCS Symposium, 2012

Classifier-free, integrated genomic predictions of prostate cancer recurrence.
Chaitanya Shivade, James L Chen
Studies in Health Technology and Informatics192, 1177--1177, 2012

Integrating population-and patient-level data for secondary use of electronic health records to study overweight and obesity.
Caryn Roth, Chaitanya P Shivade, Randi E Foraker, Peter J Embi
Studies in Health Technology and Informatics192, 1100--1100, 2012

Towards building large-scale distributed systems for twitter sentiment analysis
Vinh Ngoc Khuc, Chaitanya Shivade, Rajiv Ramnath, Jay Ramanathan
Proceedings of the 27th Annual ACM Symposium on Applied Computing, pp. 459--464, 2012

DFlow and DField: New Features for Capturing Object and Image Relationships
P. Kisilev, D. Freedman, E. Walach, A. Tzadok
International Conference on Pattern Recognition, ICPR, pp. 3590--3593, 2012
to appear

A Dynamical Appearance Model Based on Multiscale Sparse Representation: Segmentation of the Left Ventricle from 4D Echocardiography
Xiaojie Huang, Donald Dione, Colin Compas, Xenophon Papademetris, Ben Lin, Albert Sinusas, James Duncan
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2012, 58--65, Springer Berlin/Heidelberg


Complex local phase based subjective surfaces (CLAPSS) and its application to DIC red blood cell image segmentation
Taoyi Chen, Yong Zhang, Changhong Wang, Zhenshen Qu, Fei Wang, Tanveer Syeda-Mahmood
Neurocomputing, Elsevier, 2012

Finding Similar 2D X-Ray Coronary Angiograms
Tanveer Syeda-Mahmood, Fei Wang, R Kumar, D Beymer, Y Zhang, Robert Lundstrom, Edward McNulty
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2012, pp. 501--508, Springer Berlin Heidelberg

SHAPE BASED SIMILARITY OF CONTINUOUS WAVE DOPPLER IMAGES
Tanveer Fathima Syeda-mahmood, David James Beymer
US Patent 20,120,250,957

Proceedings of the Third MICCAI international conference on Medical Content-Based Retrieval for Clinical Decision Support
Hayit Greenspan, Henning M\"uller, Tanveer Syeda-Mahmood
Springer-Verlag, 2012

The active geometric shape model: A new robust deformable shape model and its applications
Quan Wang, Kim L Boyer
Computer Vision and Image Understanding, Elsevier, 2012

Lesion Segmentation in Dynamic Contrast Enhanced MRI of Breast
Liang, Xi and Ramamohanara, Kotagiri and Frazer, Helen and Yang, Qing
International Conference on Digital Image Computing Techniques and Applications (DICTA), pp. 1-8, 2012

A practical method to compute coefficients for regularization term in non-rigid registration of DCEMRI
Liang, Xi and Ramamohanarao, Kotagiri and Yang, Qing
The 20th International Society for Magnetic Resonance in Medicine (ISMRM), 2012

Overview of the Second Workshop on Medical Content--Based Retrieval for Clinical Decision Support
Adrien Depeursinge, Hayit Greenspan, Tanveer Syeda, Henning M\"uller
Medical Content-Based Retrieval for Clinical Decision Support, pp. 1--11, Springer, 2012

Image segmentation by probabilistic bottom-up aggregation and cue integration
Sharon Alpert, Meirav Galun, Achi Brandt, Ronen Basri
Pattern Analysis and Machine Intelligence, IEEE Transactions on 34(2), 315--327, IEEE, 2012

Viewpoint-aware object detection and continuous pose estimation
Daniel Glasner, Meirav Galun, Sharon Alpert, Ronen Basri, Gregory Shakhnarovich
Image and Vision Computing 30(12), 923--933, Elsevier, 2012

Automatic Extraction of Coronary Artery Tree in 2D X-ray Angiography
Tanveer Syeda-Mahmood, Ritwik Kumar, David Beymer, Yong Zhang, Fei Wang, Robert Lundstrom, Edward J McNulty, Joe Terdiman, others
IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis, 2012


2011

Tissue classification using depth-dependent ultrasound time series analysis: in-vitro animal study
Farhad Imani, Mohammad Daoud, Mehdi Moradi, Purang Abolmaesumi, Parvin Mousavi
SPIE Medical Imaging, pp. 79680F--79680F, 2011

Towards intra-operative prostate brachytherapy dosimetry based on partial seed localization in ultrasound and registration to C-arm fluoroscopy
Mehdi Moradi, S Sara Mahdavi, Sanchit Deshmukh, Julio Lobo, Ehsan Dehghan, Gabor Fichtinger, William J Morris, Septimiu E Salcudean
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2011, pp. 291--298, Springer Berlin Heidelberg

Quantifying stranded implant displacement following prostate brachytherapy
Julio Lobo, Mehdi Moradi, Nick Chng, Ehsan Dehghan, Gabor Fichtinger, William Morris, Septimiu Salcudean
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2011, 307--314, Springer


Detection of crossing white matter fibers with high-order tensors and rank-k decompositions
Fangxiang Jiao, Yaniv Gur, Chris R Johnson, Sarang Joshi
Information Processing in Medical Imaging (IPMI), pp. 538--549, 2011

A Diffusion Approach to Network Localization
Yosi Keller, Yaniv Gur
Signal Processing, IEEE Transactions on 59(6), 2642--2654, IEEE, 2011

Geometric correspondence for ensembles of nonregular shapes
Manasi Datar, Yaniv Gur, Beatriz Paniagua, Martin Styner, Ross Whitaker
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2011, pp. 368--375, Springer

Handheld Imaging System for Contactless Tri-Modal Biometric Identification
S Mil’shtein, V Oliyil Kunnil, C McPherson, A Pillai
American Journal of Biomedical Engineering 1(2), 68--71, Scientific \& Academic Publishing, 2011

Enhancement of infra-red images of human hand
Anup Pillai, Sam Mil'shtein
American Journal of Biomedical Engineering 1(1), 59--61, Scientific \& Academic Publishing, 2011

Application of Contactless Fingerprinting
S Mil’shtein, A Pillai, V Oliyil Kunnil, M Baier, P Bustos
Recent Application in Biometrics, pp. 105--124, Intech, 2011

Algorithms for Binarizing, Aligning and Recognition of Fingerprints
A Pillai, S Mil'shtein, M Baier
International Conference on Computer Vision Theory and Applications, VISAPP, 426--432, Springer, 2011

Biometrics assisted secure network transactions
V Oliyil Kunnil, A Pillai, S Milshtein
Technologies for Homeland Security (HST), 2011 IEEE International Conference on, pp. 69--74

Optimal weights for multi-atlas label fusion
Hongzhi Wang, Jung Wook Suh, John Pluta, Murat Altinay, Paul Yushkevich
Information Processing in Medical Imaging, pp. 73--84, 2011

Regression-based label fusion for multi-atlas segmentation
Hongzhi Wang, Jung Wook Suh, Sandhitsu Das, John Pluta, Murat Altinay, Paul Yushkevich
Computer Vision and Pattern Recognition (CVPR), 2011 IEEE Conference on, pp. 1113--1120

A learning-based wrapper method to correct systematic errors in automatic image segmentation: consistently improved performance in hippocampus, cortex and brain segmentation
Hongzhi Wang, Sandhitsu R Das, Jung Wook Suh, Murat Altinay, John Pluta, Caryne Craige, Brian Avants, Paul A Yushkevich
NeuroImage 55(3), 968--985, Elsevier, 2011

Landmark matching based automatic retinal image registration with linear programming and self-similarities
Yuanjie Zheng, Allan A Hunter III, Jue Wu, Hongzhi Wang, Jianbin Gao, Maureen G Maguire, James C Gee
Information Processing in Medical Imaging, pp. 674--685, 2011

Hippocampus segmentation using a stable maximum likelihood classifier ensemble algorithm
Hongzhi Wang, Jung Wook Suh, Sandhitsu Das, Murat Altinay, John Pluta, Paul Yushkevich
Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on, pp. 2036--2040

Multiscale analysis revisited: Detection of drusen and vessel in digital retinal images
Yuanjie Zheng, Hongzhi Wang, Jue Wu, Jianbin Gao, James C Gee
Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on, pp. 689--692

Image denoising by Bayesian Regression
Shimon Cohen, Rami Ben-Ari
ICIAP, 2011

Feasibility of high-frequency QRS analysis in patients with acute myocardial infarction
Guy Amit, Ori Galante, Oded Luria, Linda R Davrath, Shimon Abboud, Eran Toledo, Doron Zahger
Journal of Electrocardiology 44(6), 743, Churchill Livingstone, 2011

Electrocardiographic depolarization changes during ischemia in the isolated perfused guinea pig heart
Guy Amit, Jana Kol'akov'a, Angel Zeitoune, Shimon Abboud, Marie Nov'akov'a
Journal of Electrocardiology 44(2), e23--e24, Churchill Livingstone, 2011

Analysis of depolarization abnormalities in the evaluation of patients with chest pain
Ori Galante, G Amit, O Luria, LR Davrath, S Abboud, D Zahger
Eur Heart J 32(suppl 1), 729, 2011

2d nonrigid partial shape matching using mcmc and contour subdivision
Yu Cao, Zhiqi Zhang, Irina Czogiel, Ian Dryden, Song Wang
Computer Vision and Pattern Recognition (CVPR), 2011 IEEE Conference on, pp. 2345--2352

A Multichannel Edge-Weighted Centroidal Voronoi Tessellation algorithm for 3D super-alloy image segmentation
Yu Cao, Lili Ju, Qin Zou, Chengzhang Qu, Song Wang
Computer Vision and Pattern Recognition (CVPR), 2011 IEEE Conference on, pp. 17--24

Denoising-Enhancing Images on Elastic Manifolds
Ratner, V., Zeevi, Y. Y.
IEEE TIP, 2011

Point-to-volume registration of prostate implants to ultrasound
Ehsan Dehghan, Junghoon Lee, Pascal Fallavollita, Nathanael Kuo, Anton Deguet, E Burdette, Danny Song, Jerry Prince, Gabor Fichtinger
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2011, 615--622, Springer

Intraoperative 3D reconstruction of prostate brachytherapy implants with automatic pose correction
Junghoon Lee, Nathanael Kuo, Anton Deguet, Ehsan Dehghan, Danny Y Song, Everette C Burdette, Jerry L Prince
Physics in medicine and biology 56(15), 5011, IOP Publishing, 2011

VALIDATION OF THE CORTICAL HOMUNCULUS USING FUNCTIONAL MRI
Anirudh, Rushil
public.asu.edu, 2011

Method for continuous generation of Component Business Model heat map using execution data for a complex service enterprise
Chaitanya Shivade, Farha Mukri, Rajiv Ramnath, Jay Ramanathan
Proceedings of the International Symposium on Service Oriented System Engineering (SOSE), pp. 241--250, 2011

Automatic visual inspection and defect detection on variable data prints
M. Vans, S. Schein, C. Staelin, P. Kisilev, S. Simske, R. Dagan, S. Harush
Journal of Electronic Imaging 20(1), 13010, 2011

Maximizing all margins: Pushing face recognition with Kernel Plurality
R. Kumar, A. Banerjee, B.C. Vemuri, H. Pfister
Computer Vision (ICCV), 2011 IEEE International Conference on, pp. 2375--2382

Non-lambertian reflectance modeling and shape recovery of faces using tensor splines
R. Kumar, A. Barmpoutis, A. Banerjee, B.C. Vemuri
Pattern Analysis and Machine Intelligence, IEEE Transactions on 33(3), 533--567, IEEE, 2011

Local complex phase based level set and its application to DIC red blood cell segmentation
Taoyi Chen, Yong Zhang, Changhong Wang, Zhenshen Qu, Maomao Cai, Fei Wang, T Syeda-Mahmood
Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on, pp. 187--190

Automatic classification of images of an angiography sequence using modified shape context-based spatial pyramid kernels
Fei Wang, Yong Zhang, Hayit Greenspan, Tanveer Syeda-Mahmood, David Beymer
Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on, pp. 1091--1096

Parametric and Non-Parametric Clustering for Segmentation
Hayit Greenspan, Tanveer Syeda-Mahmood
Biomedical Image Processing, pp. 227--250, Springer Berlin Heidelberg, 2011

Pyramid histograms of motion context with application to angiogram video classification
Fei Wang, Yong Zhang, David Beymer, Hayit Greenspan, Tanveer Syeda-Mahmood
Functional Imaging and Modeling of the Heart, pp. 384--391, Springer, 2011

Generating regularization coefficients in non-rigid registration of DCE-MRI of breast
Liang, Xi and Ramamohanara, Kotagiri, and Yang, Qing and Pitman, Ale and Staring, Marius
Workshop on Breast Image Analysis (BIA) in conjunction with Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2011

Detection and Segmentation of Antialiased Text in Screen Images
Sivan Gleichman, Boaz Ophir, Amir Geva, Mattias Marder, Ella Barkan, Eli Packer
Document Analysis and Recognition (ICDAR), 2011 International Conference on, pp. 424--428

Sequential minimal eigenvalues-an approach to analysis dictionary learning
Boaz Ophir, Michael Elad, Nancy Bertin, Mark D Plumbley, others
The 19th European Signal Processing Conference (EUSIPCO-2011)

Multi-scale dictionary learning using wavelets
Boaz Ophir, Michael Lustig, Michael Elad
Selected Topics in Signal Processing, IEEE Journal of 5(5), 1014--1024, IEEE, 2011

Enhanced Active Contour Method for Locating Text
Yaakov Navon, Vladimir Kluzner, Boaz Ophir
Document Analysis and Recognition (ICDAR), 2011 International Conference on, pp. 222--226

Viewpoint-aware object detection and pose estimation
Daniel Glasner, Meirav Galun, Sharon Alpert, Ronen Basri, Gregory Shakhnarovich
Computer Vision (ICCV), 2011 IEEE International Conference on, pp. 1275--1282



2010


System and method for identification of fingerprints and mapping of blood vessels in a finger
Samson Mil'shtein, Michael Baier, Anup Pillai, Ameya M Shendye
US Patent App. 12/777,624

Generalizing edge detection to contour detection for image segmentation
Hongzhi Wang, John Oliensis
Computer Vision and Image Understanding 114(7), 731--744, Elsevier, 2010

Nearly automatic segmentation of hippocampal subfields in< i> in vivo focal T2-weighted MRI
Paul A Yushkevich, Hongzhi Wang, John Pluta, Sandhitsu R Das, Caryne Craige, Brian B Avants, Michael W Weiner, Susanne Mueller
Neuroimage 53(4), 1208--1224, Elsevier, 2010

Automatic cardiac MRI segmentation using a biventricular deformable medial model
Hui Sun, Alejandro F Frangi, Hongzhi Wang, Federico M Sukno, Catalina Tobon-Gomez, Paul A Yushkevich
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2010, pp. 468--475, Springer

Standing on the shoulders of giants: improving medical image segmentation via bias correction
Hongzhi Wang, Sandhitsu Das, John Pluta, Caryne Craige, Murat Altinay, Brian Avants, Michael Weiner, Susanne Mueller, Paul Yushkevich
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2010, pp. 105--112, Springer

Shape-based semi-automatic hippocampal subfield segmentation with learning-based bias removal
Hongzhi Wang, Sandhitsu R Das, John Pluta, Caryne Craige, Murat Altinay, Michael Weiner, Susanne Mueller, Paul A Yushkevich
Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on, pp. 424--427

Rigid shape matching by segmentation averaging
Hongzhi Wang, John Oliensis
Pattern Analysis and Machine Intelligence, IEEE Transactions on 32(4), 619--635, IEEE, 2010

Stereo matching with mumford-shah regularization and occlusion handling
Rami Ben-Ari, Nir Sochen
IEEE Transactions on Pattern Analysis and Machine Intelligence 32(11), 2071--2084, 2010

Free-shape subwindow search for object localization
Zhiqi Zhang, Yu Cao, Dhaval Salvi, Kenton Oliver, Jarrell Waggoner, Song Wang
Computer Vision and Pattern Recognition (CVPR), 2010 IEEE Conference on, pp. 1086--1093

Intra-operative prostate brachytherapy dosimetry based on partial seed localization in ultrasound and registration to C-arm fluoroscopy.
M Moradi, SS Mahdavi, S Deshmukh, J Lobo, E Dehghan, G Fichtinger, WJ Morris, SE Salcudean
Medical image computing and computer-assisted intervention: MICCAI... International Conference on Medical Image Computing and Computer-Assisted Intervention 14(Pt 1), 291--298, 2010

Object-to-object color transfer: optimal flows and smsp transformations
D. Freedman, P. Kisilev
Computer Vision and Pattern Recognition (CVPR), 2010 IEEE Conference on, pp. 287--294

Morphable Reflectance Fields for enhancing face recognition
R. Kumar, M. Jones, T.K. Marks
Computer Vision and Pattern Recognition (CVPR), 2010 IEEE Conference on, pp. 2606--2613

Radon-like features and their application to connectomics
R. Kumar, A. V\'azquez-Reina, H. Pfister
Computer Vision and Pattern Recognition Workshops (CVPRW), 2010 IEEE Computer Society Conference on, pp. 186--193

Automatic selection of keyframes from angiogram videos
T Syeda-Mahmood, D Beymer, F Wang, A Mahmood, RJ Lundstrom, N Shafee, T Holve
Pattern Recognition (ICPR), 2010 20th International Conference on, pp. 4008--4011

Similarity retrieval of cardiac reports
Tanveer Syeda-Mahmood
Engineering in Medicine and Biology Society (EMBC), 2010 Annual International Conference of the IEEE, pp. 1135--1141

Medical Content-Based Retrieval for Clinical Decision Support: First MICCAI International Workshop, MCBR-CBS 2009, London, UK, September 20, 2009. Revised Selected Papers
Barbara Caputo, Henning M\"uller, Tanveer Syeda-Mahmood, James Duncan, Fei Wang, Jayashree Kalpathy-Cramer
Mahmood, J Duncan... - 2010 - books.google.com, Springer

Coronary artery segmentation using geometric moments based tracking and snake-driven refinement
Kun Chen, Yong Zhang, Kilian Pohl, Tanveer Syeda-Mahmood, Zhihuan Song, Stephen TC Wong
Engineering in Medicine and Biology Society (EMBC), 2010 Annual International Conference of the IEEE, pp. 3133--3137

Automatic Selection of Keyframes from Angiogram Videos.
Tanveer Fathima Syeda-Mahmood, David Beymer, Fei Wang, A Mahmood, Robert J Lundstrom, N Shafee, T Holve
ICPR, pp. 4008--4011, 2010

Detecting faint curved edges in noisy images
Sharon Alpert, Meirav Galun, Boaz Nadler, Ronen Basri
Computer Vision--ECCV 2010, pp. 750--763, Springer

Twitris 2.0: Semantically empowered system for understanding perceptions from social data
Ashutosh Sopan Jadhav, Hemant Purohit, Pavan Kapanipathi, Pramod Anantharam, Ajith H Ranabahu, Vinh Nguyen, Pablo N Mendes, Alan Gary Smith, Michael Cooney, Amit P Sheth
International Semantic Web Conference (ISWC), 2010

Understanding events through analysis of social media
Amit P Sheth, Hemant Purohit, Ashutosh Sopan Jadhav, Pavan Kapanipathi, Lu Chen
2010

Cardiac disease detection from echocardiogram using edge filtered scale-invariant motion features
R. Kumar, F. Wang, D. Beymer, T. Syeda-Mahmood
Computer Vision and Pattern Recognition Workshops (CVPRW), 2010 IEEE Computer Society Conference on, pp. 162--169


2009

Ultrasound elastography--an image guidance tool for prostate brachytherapy
Septimiu E Salcudean, Xu Wen, Seyedeh Sara Mahdavi, Mehdi Moradi, J William Morris, Ingrid Spadinger
Brachytherapy 8(2), 125--126, Elsevier, 2009

Preliminary results of an ultrasound segmentation method based on statistical unit-root test of b-scan radial intensity profiles
Mehdi Moradi, Julian Guerrero, Robert Rohling, Septimiu E Salcudean
Ultrasonics Symposium (IUS), 2009 IEEE International, pp. 1--4

Tissue typing with ultrasound RF time series: Phantom studies
Mehdi Moradi, Parvin Mousavi, Robert Rohling, Purang Abolmaesumi
SPIE Medical Imaging, pp. 726516--726516, 2009

Regularizing flows over lie groups
Yaniv Gur, Nir Sochen
Journal of Mathematical Imaging and Vision 33(2), 195--208, Springer, 2009

Free water elimination and mapping from diffusion MRI
Ofer Pasternak, Nir Sochen, Yaniv Gur, Nathan Intrator, Yaniv Assaf
Magnetic Resonance in Medicine 62(3), 717--730, Wiley Online Library, 2009

Fast GL (n)-invariant framework for tensors regularization
Yaniv Gur, Ofer Pasternak, Nir Sochen
International journal of computer vision 85(3), 211--222, Springer, 2009

Locally Adaptive Filtering in Signal and Image Processing, chap. Fast GL (n)-Invariant framework for Tensors Regularization
Yaniv Gur, Ofer Pasternak, Nir Sochen
2009 - Springer, Springer

Coordinates-Based Diffusion Over the Space of Symmetric Positive-Definite Matrices
Yaniv Gur, Nir Sochen
Visualization and Processing of Tensor Fields: Advances and Perspectives, 325, Springer, 2009

Cluster analysis and classification of heart sounds
Guy Amit, Noam Gavriely, Nathan Intrator
Biomedical Signal Processing and Control 4(1), 26--36, Elsevier, 2009

Respiratory modulation of heart sound morphology
Guy Amit, Khuloud Shukha, Noam Gavriely, Nathan Intrator
American Journal of Physiology-Heart and Circulatory Physiology 296(3), H796--H805, Am Physiological Soc, 2009

The Dynamics of Image Denoising Viewed as Damped Elastic Deformation
Ratner, V., Zeevi, Y. Y.
ICIP 2009

Needle insertion parameter optimization for brachytherapy
Ehsan Dehghan, Septimiu E Salcudean
Robotics, IEEE Transactions on 25(2), 303--315, IEEE, 2009

Modeling and simulation of flexible needles
Orcun Goksel, Ehsan Dehghan, Septimiu E Salcudean
Medical engineering \& physics 31(9), 1069--1078, Elsevier, 2009

Needle path detection for brachytherapy dosimetry based on lateral power imaging and template matching
M Moradi, Xu Wen, E Dehghan, J Lobo, WJ Morris, SE Salcudean
Ultrasonics Symposium (IUS), 2009 IEEE International, pp. 1--4

Twitris: socially influenced browsing
Ashutosh Jadhav, Wenbo Wang, Raghava Mutharaju, Pramod Anantharam, Vinh Nguyen, Amit P Sheth, Karthik Gomadam, Meenakshi Nagarajan, Ajith Harshana Ranabahu
Semantic Web Challenge, International Semantic Web Conference (ISWC), 2009

Spatio-temporal-thematic analysis of citizen sensor data: Challenges and experiences
Meenakshi Nagarajan, Karthik Gomadam, Amit P Sheth, Ajith Ranabahu, Raghava Mutharaju, Ashutosh Jadhav
10th Web Information Systems Engineering (WISE), Springer, 2009

Fast mean shift by compact density representation
D. Freedman, P. Kisilev
Computer Vision and Pattern Recognition, 2009. CVPR 2009. IEEE Conference on, pp. 1818--1825, Technical report, Hewlett-Packard Laboratories

Volterrafaces: Discriminant analysis using volterra kernels
R. Kumar, A. Banerjee, B.C. Vemuri
Computer Vision and Pattern Recognition, 2009. CVPR 2009. IEEE Conference on, pp. 150--155

Generalized L2-divergence and its Application to Shape Alignment
Fei Wang, Baba Vemuri, Tanveer Syeda-Mahmood
Information Processing in Medical Imaging, pp. 227--238, Springer Berlin Heidelberg, 2009

SPECIAL SECTION ON AWARD-WINNING PAPERS FROM CVPR-Guest Editors' Introduction to the Special Section on Award Winning Papers from the IEEE CS Conference on Computer Vision and Pattern Recognition (CVPR)
K Boyer, M Shah, T Syeda-Mahmood
IEEE Transactions on Pattern Analysis and Machine Intelligence 31(12), 2113, 2009

Closed-form jensen-r\'enyi divergence for mixture of Gaussians and applications to group-wise shape registration
Fei Wang, Tanveer Syeda-Mahmood, Baba C Vemuri, David Beymer, Anand Rangarajan
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2009, pp. 648--655, Springer

A generic form processing approach for large variant templates
Yaakov Navon, Ella Barkan, Boaz Ophir
Document Analysis and Recognition, 2009. ICDAR'09. 10th International Conference on, pp. 311--315


2008


Non-Abelian invariant feature detection
Yaniv Gur, Nir Sochen
Pattern Recognition, 2008. ICPR 2008. 19th International Conference on, pp. 1--4


Line scanner for biometric applications
S Mil'shtein, J Palma, C Liessner, M Baier, A Pillai, A Shendye
Technologies for Homeland Security, 2008 IEEE Conference on, pp. 205--208

Fingerprint recognition algorithms for partial and full fingerprints
S Mil'shtein, A Pillai, A Shendye, C Liessner, M Baier
Technologies for Homeland Security, 2008 IEEE Conference on, pp. 449--452

Spiral analysis—Improved clinical utility with center detection
Hongzhi Wang, Qiping Yu, M\'onica M Kurtis, Alicia G Floyd, Whitney A Smith, Seth L Pullman
Journal of neuroscience methods 171(2), 264--270, Elsevier, 2008

Shape matching by segmentation averaging
Hongzhi Wang, John Oliensis
Computer Vision--ECCV 2008, pp. 562--575, Springer


A geometric approach for regularization of the data term in stereo-vision
Rami Ben-Ari, Nir Sochen
Journal of Mathematical Imaging and Vision 31(1), 17--33, Springer, 2008

Acoustic Indices of Cardiac Functionality.
Guy Amit, Jonathan Lessick, Noam Gavriely, Nathan Intrator
International Conference on Bio-inspired Systems and Signal Processing (BIOSIGNALS), pp. 77--83, 2008

Ischemia monitoring by analysis of depolarization changes
G Amit, LR Davrath, S Abboud, H Hod, E Toledo, S Matetzky
Computers in Cardiology 2008, pp. 377--380

Detection of acute myocardial ischemia using high-frequency QRS analysis
Guy Amit, Itzik Pinhas, Nechi Almogy, Shimon Abboud, Eran Toledo
Journal of Electrocardiology 41(6), 636, Churchill Livingstone, 2008

Needle insertion study using ultrasound-based 2d motion tracking
Ehsan Dehghan, Septimiu Salcudean
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2008, 660--667, Springer

Needle-tissue interaction modeling using ultrasound-based motion estimation: Phantom study
Ehsan Dehghan, Xu Wen, Reza Zahiri-Azar, Maud Marchal, Septimiu E Salcudean
Computer Aided Surgery 13(5), 265--280, Informa UK Ltd UK, 2008

Methods for the estimation of sub-sample motion of digitized ultrasound echo signals in two dimensions
Reza Zahiri-Azar, Orcun Goksel, Ta Shan Yao, Ehsan Dehghan, Joseph Yan, Septimiu E Salcudean
Engineering in Medicine and Biology Society, 2008. EMBS 2008. 30th Annual International Conference of the IEEE, pp. 5581--5584

Motion estimation based color transfer and its application to color video compression
R. Kumar, S.K. Mitra
Pattern Analysis \& Applications 11(2), 131--139, Springer, 2008

Beyond the lambertian assumption: A generative model for apparent brdf fields of faces using anti-symmetric tensor splines
A. Barmpoutis, R. Kumar, B.C. Vemuri, A. Banerjee
Computer Vision and Pattern Recognition, 2008. CVPR 2008. IEEE Conference on, pp. 1--6

Multi-fiber reconstruction from DW-MRI using a continuous mixture of von Mises-Fisher distributions
R. Kumar, A. Barmpoutis, B.C. Vemuri, P.R. Carney, T.H. Mareci
Computer Vision and Pattern Recognition Workshops, 2008. CVPRW'08. IEEE Computer Society Conference on, pp. 1--8

Shape-based retrieval of heart sounds for disease similarity detection
Tanveer Syeda-Mahmood, Fei Wang
Computer Vision--ECCV 2008, pp. 568--581, Springer Berlin Heidelberg


2007

Method for Improved Ultrasonic Detection
Mehdi Moradi, Purang Abolmaesumi, Parvin Mousavi, Eric Sauerbrei, Robert Siemens, Phillip Isotalo
US Patent App. 12/227,697

A new approach to analysis of RF ultrasound echo signals for tissue characterization: animal studies
Mehdi Moradi, Parvin Mousavi, Philip A Isotalo, David R Siemens, Eric E Sauerbrei, Purang Abolmaesumi
Medical Imaging, pp. 65130P--65130P, 2007

Fast invariant Riemannian DT-MRI regularization
Yaniv Gur, Nir Sochen
Computer Vision, 2007. ICCV 2007. IEEE 11th International Conference on, pp. 1--7

Coordinate-free diffusion over compact Lie-groups
Yaniv Gur, Nir Sochen
Scale Space and Variational Methods in Computer Vision, pp. 580--591, Springer, 2007

Diffusion over tensor fields via Lie group PDE flows: Lagrangian action approach
Yaniv Gur, Nir Sochen
Contemporary Mathematics438, 59, Providence, RI; American Mathematical Society; 1999, 2007

Regularization of diffusion tensor MRI via local coordinates
Yaniv Gur, Ofer Pasternak, Nir Sochen
PAMM 7(1), 1011211--1011212, Wiley Online Library, 2007

Photodetector with uniform response in 620 nm to 870 nm range
A Shendye, A Pillai, S Shtein
Semiconductor Device Research Symposium, 2007 International, pp. 1--2

Variational stereo vision with sharp discontinuities and occlusion handling
Rami Ben-Ari, Nir Sochen
IEEE 11th International Conference on Computer Vision (ICCV), pp. 1--7, 2007

Hough Transform with Parameters Chosen by LMSE Method
Xiang-de Zhang, Qi Wang, Ya-ping Huang, Yu Cao
JOURNAL-NORTHEASTERN UNIVERSITY NATURAL SCIENCE 28(9), 1270, 2007

Iris recognition by restructuring characteristic vector field
Xiang-de Zhang, Yu Cao, Qi Wang, Qing-song Tang
JOURNAL-NORTHEASTERN UNIVERSITY NATURAL SCIENCE 28(8), 1098, 2007

Telegraph-Diffusion Operator for Image Enhancement
Ratner, V., Zeevi, Y.Y.
ICIP 2007

Needle insertion point and orientation optimization in non-linear tissue with application to brachytherapy
Ehsan Dehghan, Septimiu E Salcudean
Robotics and Automation, 2007 IEEE International Conference on, pp. 2267--2272

Modeling of needle-tissue interaction using ultrasound-based motion estimation
Ehsan Dehghan, Xu Wen, Reza Zahiri-Azar, Maud Marchal, Septimiu Salcudean
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2007, 709--716, Springer

Parameter identification for a needle-tissue interaction model
Ehsan Dehghan, Xu Wen, Reza Zahiri-Azar, Maud Marchal, Septimiu E Salcudean
Engineering in Medicine and Biology Society, 2007. EMBS 2007. 29th Annual International Conference of the IEEE, pp. 190--193

Unsupervised clustering using multi-resolution perceptual grouping
Tanveer Syeda-Mahmood, Fei Wang
Computer Vision and Pattern Recognition, 2007. CVPR'07. IEEE Conference on, pp. 1--8

Show-through cancellation in scanned images using blind source separation techniques
Boaz Ophir, David Malah
Image Processing, 2007. ICIP 2007. IEEE International Conference on, pp. III--233

Image segmentation by probabilistic bottom-up aggregation and cue integration
Sharon Alpert, Meirav Galun, Ronen Basri, Achi Brandt
Computer Vision and Pattern Recognition, 2007. CVPR'07. IEEE Conference on


2006

P3E-7 A New Feature For Detection Of Prostate Cancer Based On RF Ultrasound Echo Signals
Mehdi Moradi, Purang Abolmaesumi, Phillip A Isotalo, David R Siemens, Eric E Sauerbrei, Parvin Mousavi
Ultrasonics Symposium, 2006. IEEE, pp. 2084--2087

Sensor band selection for multispectral imaging via average normalized information
Hongzhi Wang, Elli Angelopoulou
Journal of Real-Time Image Processing 1(2), 109--121, Springer, 2006

Salient contour detection using a global contour discontinuity measurement
Hongzhi Wang, John Oliensis
Computer Vision and Pattern Recognition Workshop, 2006. CVPRW'06. Conference on, pp. 190--190

A general framework and new alignment criterion for dense optical flow
Rami Ben-Ari, Nir Sochen
IEEE Computer Society Conference on Computer Vision and Pattern Recognition, pp. 529--536, 2006

Scalability of multimedia applications on next-generation processors
Guy Amit, Yaron Caspi, Ran Vitale, Adi T Pinhas
IEEE International Conference on Multimedia and Expo (ICME), 2006, pp. 17--20

Automatic segmentation of heart signals
G Amit, N Gavriely, N Intrator
18th EURASIP Conference BIOSIGNAL, pp. 6-8, 2006

A comparison of needle bending models
Ehsan Dehghan, Orcun Goksel, Septimiu Salcudean
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2006, 305--312, Springer

Comparison of linear and non-linear models in 2D needle insertion simulation
Ehsan Dehghan, Septimiu E Salcudean
Proc. Workshop on Computational Biomechanics for Medicine (In conjunction with MICCAI 2006), 117--124

Needle Insertion Point and Heading Optimization with Application to Brachytherapy
Ehsan Dehghan, Septimiu E Salcudean
Proc. Workshop on Medical Robotics (In conjunction with MICCAI), 47--53, 2006


Method and apparatus for semantic search of schema repositories
Mary Ann Roth, Gauri Shah, Tanveer Fathima Syeda-Mahmood, Willi Urban, Lingling Yan
US Patent App. 11/349,081


2005

Denoising tensors via Lie group flows
Yaniv Gur, N Sochen
Variational, Geometric, and Level Set Methods in Computer Vision, pp. 13--24, Springer, 2005

Real-Time H. 264 Encoding by Thread-Level Parallelism: Gains and Pitfalls.
Guy Amit, Adi Pinhas
17th IASTED International Conference on Parallel and Distributed Computing and Systems (PDCS), pp. 254--259, 2005

Automatic extraction of physiological features from vibro-acoustic heart signals: correlation with echo-doppler
G Amit, N Gavriely, J Lessick, N Intrator
Computers in Cardiology 2005, pp. 299--302


2004

Non-isotropic regularization of the correspondence space in stereo-vision
Rami Ben-Ari, Nir Sochen
Proceedings of the 17th International Conference on Pattern Recognition (ICPR), pp. 293--296, 2004

Introduction: special issue on event detection in video
Tanveer Syeda-Mahmood, Ismail Haritaoglu, Thomas Huang
Computer Vision and Image Understanding 96(2), 97--99, Elsevier Science Inc., 2004


2003

Automatic landmark detection on chromosomes' images for feature extraction purposes
M Moradi, SK Setarehdan, SR Ghaffari
Image and Signal Processing and Analysis, 2003. ISPA 2003. Proceedings of the 3rd International Symposium on, pp. 567--570

Method and means of matching documents based on spatial region layout
Tanveer F Syeda-mahmood
EP Patent 0,923,044


2001

CP3: Robust, Output-sensitive Display of Convex Polyhedra in Scanline Mode
Barkan, Ella and Gordon, Dan
Computer Graphics Forum, pp. 257--269, 2001


2000

Wavelet domain ML reconstruction in emission tomography
P. Kisilev, M. Jacobson, Y.Y. Zeevi
Engineering in Medicine and Biology Society, 2000. Proceedings of the 22nd Annual International Conference of the IEEE, pp. 90--93

Interval hash tree: an efficient index structure for searching object queries in large image databases
TF Syeda-Mahmood, P Raghaan, N Megiddo
Content-based Access of Image and Video Libraries, 2000. Proceedings. IEEE Workshop on, pp. 78--82


1998

NetView: integrating large scale distributed visual databases
Aidong Zhang, Wendy Chang, Gholamhosein Sheikholeslami, Tanveer F Syeda-Mahmood
MultiMedia, IEEE 5(3), 47--59, IEEE, 1998

Image organization and retrieval using a flexible shape model
Wei Zhu, T Syeda-Mahmood
Content-Based Access of Image and Video Database, 1998. Proceedings., 1998 IEEE International Workshop on, pp. 31--40


1997

Indexing of handwritten document images
Tanveer Syeda-Mahmood
Document Image Analysis, 1997.(DIA'97) Proceedings., Workshop on, pp. 66--73

Data-and model-driven selection using parallel line groups
Tanveer Fathima Syeda-Mahmood
Computer Vision and Image Understanding 67(3), 205--222, Elsevier, 1997


1996

Recognizing similarity through a constrained non-rigid transform
TF Syeda-Mahmood
Pattern Recognition, 1996., Proceedings of the 13th International Conference on, pp. 617--621

Geometric hashing for query localization in image databases
Tanveer F Syeda-Mahmood
Photonics East'96, pp. 53--65, 1996


1995

Indexing of technical manual document databases [2420-39]
TF Syeda-Mahmood
PROCEEDINGS-SPIE THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING, 430--430, SPIE INTERNATIONAL SOCIETY FOR OPTICAL, 1995


1994

Data and model-driven selection using closely-spaced parallel-line groups
Tanveer Fathima Syeda-Mahmood
Computer Vision and Pattern Recognition, 1994. Proceedings CVPR'94., 1994 IEEE Computer Society Conference on, pp. 881--886


1993

Model-driven selection using texture
Tanveer Fathima Syeda-Mahmood
Proc. 4th British Machine Vision Conference (J. Illingworth, ed.),(Univ. of Surrey, Guildford), 65--74, 1993


Year Unknown

Discriminating normal and abnormal left ventricular shapes in four-chamber view 2D echocardiography

Mahmood, Q Wang... - ... Imaging (ISBI), 2014 ..., 2014 - ieeexplore.ieee.org



Automatic detection of coronary stenosis in X-ray angiography through spatio-temporal tracking

Mahmood... - ... Imaging (ISBI), 2014 ..., 2014 - ieeexplore.ieee.org


Automatic Detection of Dilated Cardiomyopathy in Cardiac Ultrasound Videos

Mahmood - AMIA Annual Symposium ..., 2014 - ncbi.nlm.nih.gov

Mining Echocardiography Workflows for Disease Discriminative Patterns

Mahmood, D Beymer... - AMIA Annual ..., 2013 - ncbi.nlm.nih.gov



Better medicine through machine learning

Communications of the ACM, 2012 - dl.acm.org

Distributed Visual Databases
Aidong Zhang, Wendy Chang, Gholamhosein Sheikholeslami, Tanveer F Syeda-Mahmood
0

Clustering T inie-Varying Gene Expression Profiles using Scale-space Signals
Tanveer Syeda-Mahmood
0

Editorial of miccai workshop proceedings on medical content-based retrieval for clinical decision support
Barbara Caputo, Henning M\"uller, Tanveer Syeda Mahmood, Jayashree Kalpathy-Cramer, Fei Wang, James Duncan
Proceedings on MICCAI Workshop on Medical Content-based Retrieval for Clinical Decision Support, 0

A Bidirectional Top-down and Bottom-Up Model for Angiogram Vessel Segmentation
F Wang, R Kumar, Y Zhang, D Beymer, C Compas, T Syeda-Mahmood
Mahmood - vpa2.sabanciuniv.edu, 0




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