Soft Matter Science - Invited Talks


SELECTED INVITED TALKS

  • Complete Wetting of Graphene by Biological Membrane, American Physics Society March Meeting, Baltimore, USA, March 14-18, 2016
  • Radial Dependence of DNA Translocation Velocity in a Solid-State Nanopore, Biophysical Society Meeting, Los Angeles , USA, Feb 27-March 2, 2016
  • Role of Hydrogen bonding in water on different length and time scales, Mini-Water Symposium at Stony Brook University.  Stony Brook, NY Aug. 3, 2016
  • Modeling peptide-protein binding with information accelerated molecular dynamics. 2016 Workshop on Free Energy Methods in Drug Design: Targeting Cancer, Boston, MA. May 16-18th, 2016
  • Large Scale Biomolecular Simulations for Real World Applications, STFC Workshop on Life Sciences, STFC, Daresbury, UK, July 14-15, 2016
  • De Novel Design of Nanomedicine through Large Scale Molecular Modeling of Protein-Nanoparticle Interactions, University of Toronto, Canada, March 24, 2016
  • De Novel Design of Nanomedicine: Implications from Molecular Modeling of Nanotoxicity, Deaking University, Australia, Jan 21, 2016
  • Plenary Talk, Modeling nanotoxicity: Molecular simulation of protein-nanoparticle interactions and their implications in nanomedicine, International Conference on Bio-Nano Interactions, Monash University, Melbourne, Australia, Jan 18-19, 2016
  • Water permeation, desalination, gating, and dipole signal transduction with nanopores, PacificChem 2015, Hawaii, Dec. 15-20, 2015
  • Modeling nanotoxicity: Molecular simulation of protein-nanoparticle interactions and their implications in nanomedicine, PacificChem 2015, Hawaii, Dec. 15-20, 2015
  • HIV Vaccine Development: Molecular Modeling of T Cell MHC-peptide-TCR and Natural Killer KIR2DL3 Complexes, Ragon Institute, Harvard Medical School, Harvard, Boston, September 28, 2015
  • Keynote Lecture, Large Scale Molecular Simulation of Nanoparticle-Protein Interactions and their Implications in Nanomedicine, The 6th International Conference on Nanoscience and Technology (ChinaNano 2015), Beijing, China, September 3-6, 2015
  • Large Scale Molecular Simulation of Nanoparticle-Protein Interactions and their Implications in Nanomedicine, 250 ACS National Meeting, Boston, August 16-20, 2015
  • Molecular Recognition of Metabotropic Glutamate Receptor Type 1 (mGluR1), 250 ACS National Meeting, Boston, August 16-20, 2015
  • HIV Vaccine Development: Molecular Modeling of HIV pMHC-TCR Complex Binding, Snowmass Biophysics Workshop on Free Energy Calculations, Snowmass, Colorado, July 5-9, 2015
  • HIV Vaccine Development: Molecular Modeling of HIV pMHC-TCR Complex Binding, Department of Oncological Sciences and Medicine, School of Medicine at Mt Sinai, June 8, 2015
  • De Novo Design of Nanomedicine: Implications from Nanotoxicity Modeling, Department of Biomedical Engineering, UT-Austin, Austin, TX, April 26, 2015
  • De Novo Design of Nanomedicine: Implications from Nanotoxicity Modeling, China Nanomedicine 2015, Hangzhou, China, April 6-9, 2015
  • Payel Das, Multi-scale modeling of nature's nano-machines, Department of Chemical and Biological Engineering, SUNY Buffalo, Buffalo, NY, March 2010
  • Ruhong Zhou, Action of urea: A molecular picture of the urea denaturing mechanism, Gordon Research Conference (GRC) on Protein Folding Dynamics, Ventura, CA, Jan. 10-15, 2010
  • Ruhong Zhou, Protein misfolding and aggregation with BlueGene, Department of Physics, National Taiwan University, Taipei, Taiwan, August 11, 2009
  • Ruhong Zhou, Dewetting Transition and Hydrophobic Collapse in Biological Complexes, Kavli Workshop on Protein Function and Dynamics, Kavli Institute of Theoretical Physics, Beijing, July 28, 2009
  • Ruhong Zhou, Exploring Hydrophobic Interactions in Protein Folding, Department of Molecular Pharmacology, Physiology and Biotechnology (MPPB), Brown University, Rohde Island, Jan 25, 2008
  • Payel Das, Folding and aggregation of human gamma D crystallin: A protein involved in cataract formation, ACS Fall National Meeting. Philadelphia, PA, August 2008
  • Payel Das, Free Energy Simulations Reveal a Double Mutant Avian H5N1 Virus Hemagglutinin with Altered Receptor Binding Specificity, ACS Fall National Meeting. Philadelphia, PA, August 2008
  • Ruhong Zhou, Replica Exchange Solute Tempering Method, Symposium on Sampling Enhancement, Telluride Science Research Center (TSRC), Telluride, July 14-18, 2008
  • Ruhong Zhou, Nanoscale Dewetting Transition in Protein Complex Folding, Department of Physics, Fudan University, Shanghai, China, October 24, 2008
  • Ruhong Zhou, Protein Folding Free Energy Landscape with Replica Exchange Method, 6th International Conference on Monte Carlo Methods (MCM2007), University of Reading, Reading, UK, June 20-21, 2007
  • Ruhong Zhou, Protein Folding with Molecular Dynamics, Biological Physics and Biophysical Chemistry Seminar, Department of Chemistry, SUNY-Stony Brooks, Stony Brooks, April 30, 2007
  • Payel Das, Understanding protein landscapes at multi-resolution, Department of Chemistry, Stanford University, Stanford, CA, January 2007
  • Ruhong Zhou, Dewetting in Nanoscale Hydrophobic Particles Collapse and Protein Complexes Folding, School of Medicine, Washington University, St. Louis, December 4, 2006
  • Ruhong Zhou, BlueGene: Single Mutation Effect on Protein Lysozyme Misfolding, Nuemann Institute of Computing (NIC), Julich, Germany, June 9, 2006
  • Ruhong Zhou, Dewetting Transition and Hydrophobic Collapse in Protein Aggregates, College of Biological Science, Nanjing University, Nanjing, July 14, 2005
  • Ruhong Zhou, Dewetting Transition in Nanoscale Hydrophobic Plate Collapse and Protein Aggregates, Beijing International Conference on Protein Folding, Dynamics and Function, Beijing University, Beijing, July 3, 2005
  • Ruhong Zhou, Dewetting Transition and Hydrophobic Collapse in Protein Aggregates, 3rd US-Japan Conference on Protein Folding and Design, University of Pennsylvania, Philadelphia, May 4, 2005
  • Ruhong Zhou, Protein Folding with Molecular Dynamics, College of Computing, National University of Singapore, Singapore, June 22, 2004
  • Ruhong Zhou, Exploring Free Energy Landscape of Protein Folding with Molecular Dynamics, Department of Chemistry, University of Pennsylvania, Philadelphia, May 21, 2004
  • Ruhong Zhou, Protein Folding with Large Scale Molecular Dynamics, Department of Chemistry, Kobe University, Kobe, Japan, April 20. 2004
  • Ruhong Zhou, Exploring Free Energy Landscape of Protein Folding with Molecular Dynamics, National Institute of Natural Science, Institute of Molecular Science, Okazaki, Japan, April 19, 2004
  • Ruhong Zhou, Protein Folding and Conformational Dynamics: Comparison to NMR, Gordon Research Conference (GRC) on Computational Aspects - Biomolecular NMR, Ventura, CA, Jan. 19, 2004
  • Ruhong Zhou, Hydrophobicity Spatial Profiling of Proteins, Fudan Bioinformatics Workshop, Fudan University, Shanghai, Dec. 17-20, 2003
  • Ruhong Zhou, Hydrophobic Spatial Profiling of Proteins, invited talk, The 7th International Conference on Research in Computational Molecular Biology (RECOMB2003), Berlin, Germany, April 11, 2003
  • Ruhong Zhou, Protein conformational space search with efficient sampling algorithms, Department of Chemistry, Yale University, May 10, 2002
  • Ruhong Zhou, Protein Folding with Molecular Dynamics: Novel Algorithms, Department of Computer Science, University of Notre Dame, Notre Dame, July 16, 2002
  • Ruhong Zhou, Early results from the Blue Gene science project, invited talk, Biophysics Department, Johns Hopkins University, Baltimore, Mar. 4, 2002
  • Ruhong Zhou, Protein folding with molecular dynamics: new algorithms, invited talk, School of Medicine, Washington University, St. Louis, Feb. 16, 2001

 

 

 




Members


Alumni

  • Otitoaleke G. Akinola
  • David R. Bell
  • Matteo Castelli
  • Camilo Jimenez
  • Yuxing Peng
  • Michael Pitman
  • Raul Araya Secchi
  • Frank Suits
  • Jacinta Wubben
  • Zhen Xia
  • Payel Das