Yaniv Gur  Yaniv Gur photo       

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Research Software Engineer, Medical Image Analysis and Machine Learning
Almaden Research Center, San Jose, CA
  +1dash408dash927dash1437

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2017

Automatic Labeling of Continuous Wave Doppler Images Based on Combined Image and Sentence Networks
Mehdi Moradi, Yufan Guo, Yaniv Gur, Tanveer Syeda-Mahmood
IEEE 13th International Symposium on Biomedical Imaging (ISBI), 2017


2016

Medical sieve: a cognitive assistant for radiologists and cardiologists
T. Syeda-Mahmood, E. Walach, D. Beymer, F. Gilboa-Solomon, M. Moradi, P. Kisilev, D. Kakrania, C. Compas, H. Wang, R. Negahdar, Y. Cao, T. Baldwin, Y. Guo, Y. Gur, D. Rajan, A. Zlotnick, S. Rabinovici-Cohen, R. Ben-Ari, Amit Guy, P. Prasanna, J. Morey, O.
SPIE, pp. 97850A-97850A-6, 2016

Identifying Patients at Risk for Aortic Stenosis Through Learning from Multimodal Data
Tanveer Syeda-Mahmood, Yanrong Guo, Mehdi Moradi, D. Beymer, D. Rajan, Yu Cao, Yaniv Gur, Mohammadreza Negahdar
Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2016: 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part III, pp. 238--245, Springer International Publishing

A Cross-Modality Neural Network Transform for Semi-automatic Medical Image Annotation
Mehdi Moradi, Yufan Guo, Yaniv Gur, Mohammadreza Negahdar, Tanveer Syeda-Mahmood
Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2016: 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part II, pp. 300--307, Springer International Publishing

A hybrid learning approach for semantic labeling of cardiac CT slices and recognition of body position
Mehdi Moradi, Yaniv Gur, Hongzhi Wang, Prasanth Prasanna, Tanveer Syeda-Mahmood
2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI), pp. 1418--1421


2015

Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use?
Lipeng Ning, Frederik Laun, Yaniv Gur, Edward VR DiBella et al.
Medical Image Analysis26, 316-331, 2015

MRI reconstruction of multi-image acquisitions using a rank regularizer with data reordering
Ganesh Adluru, Yaniv Gur, Liyong Chen, David Feinberg, Jeffrey Anderson, and Edward V. R. DiBella
Medical Physics42, 4734 - 4744, 2015

Automatic Anatomical Shape Correspondence and Alignment Using Mesh Features
Tal Darom, Yaniv Gur, Chen Hajaj, Yosi Keller
International Symposium on Biomedical Imaging (ISBI), 2015


2014

Quantifying Tikhonov Regularization Uncertainty in the Inverse Problem of Electrocardiography
Jessie J France, Yaniv Gur, Robert M Kirby and Chris R Johnson
Computing in Cardiology, 2014

Assessment of white matter microstructure in stroke patients using NODDI
Ganesh Adluru, Yaniv Gur, Jeffrey Anderson, Lorie Richards, Nagesh Adluru, Edward DiBella
EMBC, 2014

Motion is Inevitable: The Impact of Motion Correction Schemes on HARDI Reconstructions
S. Elhabian, Y. Gur, J. Piven, M. Styner, I. Leppert, G. Bruce Pike, G. Gerig
Computational Diffusion MRI (CDMRI), 2014

Generalized HARDI Invariants by Method of Tensor Contraction
Yaniv Gur, Chris R Johnson
International Symposium on Biomedical Imaging (ISBI), 2014

A preliminary study on the effect of motion correction on HARDI reconstruction
Shireen Elhabian, Yaniv Gur, Clement Vachet, Joseph Piven, Martin Styner, Ilana Leppert, G Bruce Pike, Guido Gerig
Biomedical Imaging (ISBI), 2014 IEEE 11th International Symposium on, pp. 1055--1058

Subject-Motion Correction in HARDI Acquisitions: Choices and Consequences
Shireen Y. Elhabian, Yaniv Gur, Clement Vachet, Joseph Piven, Martin Andreas Styner, Ilana R Leppert, Bruce Pike, Guido Gerig
Frontiers in Neurology - Brain Imaging Methods, 2014


2013

Quantitative comparison of reconstruction methods for intra-voxel fiber recovery from diffusion MRI
Alessandro Daducci, E Canales-Rodriguez, Maxime Descoteaux, Y Gur, M Mani, et al.
IEEE Transactions on Medical Imaging (TMI), IEEE, 2013

Graph Diffusion Distance: A Difference Measure for Weighted Graphs Based on the Graph Laplacian Exponential Kernel
DK Hammond, Y Gur, CR Johnson
Global Conference on Signal and Information Processing (GlobalSIP), 2013

Model selection and estimation of multi-compartment models in diffusion mri with a rician noise model
Xinghua Zhu, Yaniv Gur, Wenping Wang, P Thomas Fletcher
Information Processing in Medical Imaging (IPMI), pp. 644--655, 2013


2012

SPD tensors regularization via Iwasawa decomposition
Yaniv Gur, Ofer Pasternak, Nir Sochen
Mathematical Methods for Signal and Image Analysis and Representation, pp. 83--100, Springer, 2012

White matter structure assessment from reduced HARDI data using low-rank polynomial approximations
Yaniv Gur, Fangxiang Jiao, Stella Xinghua Zhu, Chris R Johnson
Medical image computing and computer-assisted intervention: MICCAI... International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 186, 2012

Uncertainty visualization in HARDI based on ensembles of ODFs
Fangxiang Jiao, Jeff M Phillips, Yaniv Gur, Chris R Johnson
Pacific Visualization Symposium (PacificVis), 2012 IEEE, pp. 193--200


2011

Geometric correspondence for ensembles of nonregular shapes
Manasi Datar, Yaniv Gur, Beatriz Paniagua, Martin Styner, Ross Whitaker
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2011, pp. 368--375, Springer

A Diffusion Approach to Network Localization
Yosi Keller, Yaniv Gur
Signal Processing, IEEE Transactions on 59(6), 2642--2654, IEEE, 2011

Detection of crossing white matter fibers with high-order tensors and rank-k decompositions
Fangxiang Jiao, Yaniv Gur, Chris R Johnson, Sarang Joshi
Information Processing in Medical Imaging (IPMI), pp. 538--549, 2011


2009

Coordinates-Based Diffusion Over the Space of Symmetric Positive-Definite Matrices
Yaniv Gur, Nir Sochen
Visualization and Processing of Tensor Fields: Advances and Perspectives, 325, Springer, 2009

Locally Adaptive Filtering in Signal and Image Processing, chap. Fast GL (n)-Invariant framework for Tensors Regularization
Yaniv Gur, Ofer Pasternak, Nir Sochen
2009 - Springer, Springer

Fast GL (n)-invariant framework for tensors regularization
Yaniv Gur, Ofer Pasternak, Nir Sochen
International journal of computer vision 85(3), 211--222, Springer, 2009

Free water elimination and mapping from diffusion MRI
Ofer Pasternak, Nir Sochen, Yaniv Gur, Nathan Intrator, Yaniv Assaf
Magnetic Resonance in Medicine 62(3), 717--730, Wiley Online Library, 2009

Regularizing flows over lie groups
Yaniv Gur, Nir Sochen
Journal of Mathematical Imaging and Vision 33(2), 195--208, Springer, 2009


2008


Non-Abelian invariant feature detection
Yaniv Gur, Nir Sochen
Pattern Recognition, 2008. ICPR 2008. 19th International Conference on, pp. 1--4


2007

Regularization of diffusion tensor MRI via local coordinates
Yaniv Gur, Ofer Pasternak, Nir Sochen
PAMM 7(1), 1011211--1011212, Wiley Online Library, 2007

Diffusion over tensor fields via Lie group PDE flows: Lagrangian action approach
Yaniv Gur, Nir Sochen
Contemporary Mathematics438, 59, Providence, RI; American Mathematical Society; 1999, 2007

Coordinate-free diffusion over compact Lie-groups
Yaniv Gur, Nir Sochen
Scale Space and Variational Methods in Computer Vision, pp. 580--591, Springer, 2007

Fast invariant Riemannian DT-MRI regularization
Yaniv Gur, Nir Sochen
Computer Vision, 2007. ICCV 2007. IEEE 11th International Conference on, pp. 1--7


2005

Denoising tensors via Lie group flows
Yaniv Gur, N Sochen
Variational, Geometric, and Level Set Methods in Computer Vision, pp. 13--24, Springer, 2005




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