Kahn Rhrissorrakrai  Kahn Rhrissorrakrai photo       

contact information

Research Staff Member
Thomas J. Watson Research Center, Yorktown Heights, NY USA
  +914dash945dash2908

links



2016

A Crowdsourcing Approach to Developing and Assessing Prediction Algorithms for AML Prognosis
David P. Noren, Byron L. Long, Raquel Norel, Kahn Rrhissorrakrai, Kenneth Hess, Chenyue Wendy Hu, Alex J. Bisberg, Andre Schultz, Erik Engquist, Li Liu, Xihui Lin, Gregory M. Chen, Honglei Xie, Geoffrey A. M. Hunter, Paul C. Boutros, Oleg Stepanov, DREAM
PLOS Computational Biology, 2016

Watson for Genomics: Moving Personalized Medicine Forward
Rhrissorrakrai K., Koyama T., and Parida L.
Trends in Cancer, 2016


2015

A crowd-sourcing approach for the construction of species-specific cell signaling networks.
Bilal E, Sakellaropoulos T, Melas IN, Messinis DE, Belcastro V, Rhrissorrakrai K, Meyer P, Norel R, Iskandar A, Blaese E, Rice JJ, Peitsch MC, Hoeng J, Stolovitzky G, Alexopoulos LG, Poussin C; Challenge Participants.
Bioinformatics., 2015

Understanding the limits of animal models as predictors of human biology: lessons learned from the sbv IMPROVER Species Translation Challenge.
Rhrissorrakrai K, Belcastro V, Bilal E, Norel R, Poussin C, Mathis C, Dulize RH, Ivanov NV, Alexopoulos L, Rice JJ, Peitsch MC, Stolovitzky G, Meyer P, Hoeng J.
Bioinformatics., 2015

Inter-species inference of gene set enrichment in lung epithelial cells from proteomic and large transcriptomic datasets.
Hormoz S, Bhanot G, Biehl M, Bilal E, Meyer P, Norel R, Rhrissorrakrai K, Dayarian A.
Bioinformatics., 2015

Inter-species pathway perturbation prediction via data-driven detection of functional homology.
Hafemeister C, Romero R, Bilal E, Meyer P, Norel R, Rhrissorrakrai K, Bonneau R, Tarca AL.
Bioinformatics., 2015

Inter-species prediction of protein phosphorylation in the sbv IMPROVER species translation challenge.
Biehl M, Sadowski P, Bhanot G, Bilal E, Dayarian A, Meyer P, Norel R, Rhrissorrakrai K, Zeller MD, Hormoz S.
Bioinformatics, 2015


2014

Predicting protein phosphorylation from gene expression: top methods from the IMPROVER Species Translation Challenge.
Dayarian A, Romero R, Wang Z, Biehl M, Bilal E, Hormoz S, Meyer P, Norel R, Rhrissorrakrai K, Bhanot G, Luo F, Tarca AL.
Bioinformatics., 2014

The species translation challenge-a systems biology perspective on human and rat bronchial epithelial cells.
Poussin C, Mathis C, Alexopoulos LG, Messinis DE, Dulize RH, Belcastro V, Melas IN, Sakellaropoulos T, Rhrissorrakrai K, Bilal E, Meyer P, Talikka M, Bou S, Norel R, Rice JJ, Stolovitzky G, Ivanov NV, Peitsch MC, Hoeng J.
Sci Data., 2014


2013

On Crowd-verification of Biological Networks.
Boue S, Di Fabio A, Hayes W, Hoeng J, Iskandar A, Kleiman R, Norel R, O'Neel B, Peitsch MC, Poussin C, Pratt D, Rhrissorrakrai K, Schlage WK, Stolovitzky G, Talikka M.
Bioinform Biol Insights., 2013

sbv IMPROVER Diagnostic Signature Challenge: Design and results
Kahn Rhrissorrakrai, J Jeremy Rice, Stephanie Boue, Marja Talikka, Erhan Bilal, Florian Martin, Pablo Meyer, Raquel Norel, Yang Xiang, Gustavo Stolovitzky, others
Systems Biomedicine 1(4), 3--14, Landes Bioscience, 2013


2012

Systems Biology Approach for Characterizing the Condition-Specific Usage and Expression of Genes, Gene Products and Functional Modules
Kahn Rhrissorrakrai
Ph.D. Thesis, 2012

Electrical activity can impose time of day on the circadian transcriptome of pacemaker neurons
Dogukan Mizrak, Marc Ruben, Gabrielle N Myers, Kahn Rhrissorrakrai, Kristin C Gunsalus, Justin Blau
Current Biology 22(20), 1871--1880, Cell Press, 2012


2011

Networks in Caenorhabditis elegans
Kristin C Gunsalus, Kahn Rhrissorrakrai
Current opinion in genetics \& development 21(6), 787--798, Elsevier Current Trends, 2011

MINE: module identification in networks
Kahn Rhrissorrakrai, Kristin C Gunsalus
BMC bioinformatics 12(1), 192, BioMed Central Ltd, 2011


2010

Benzo [a] pyrene diol epoxide stimulates an inflammatory response in normal human lung fibroblasts through a p53 and JNK mediated pathway
Kristian Dreij, Kahn Rhrissorrakrai, Kristin C Gunsalus, Nicholas E Geacintov, David A Scicchitano
Carcinogenesis 31(6), 1149--1157, Oxford Univ Press, 2010

Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project
Mark B Gerstein, Zhi John Lu, Eric L Van Nostrand, Chao Cheng, Bradley I Arshinoff, Tao Liu, Kevin Y Yip, Rebecca Robilotto, Andreas Rechtsteiner, Kohta Ikegami, others
Science 330(6012), 1775--1787, American Association for the Advancement of Science, 2010


2008

Mating induces an immune response and developmental switch in the Drosophila oviduct
Anat Kapelnikov, Einat Zelinger, Yuval Gottlieb, Kahn Rhrissorrakrai, Kristin C Gunsalus, Yael Heifetz
Proceedings of the National Academy of Sciences 105(37), 13912--13917, National Acad Sciences, 2008

A Protein Domain-Based Interactome Network for< i> C. elegans Early Embryogenesis
Mike Boxem, Zoltan Maliga, Niels Klitgord, Na Li, Irma Lemmens, Miyeko Mana, Lorenzo de Lichtervelde, Joram D Mul, Diederik van de Peut, Maxime Devos, others
Cell 134(3), 534--545, Elsevier, 2008


Year Unknown

The next issue of this journal Genetics of system biology
Kristin C Gunsalus, Kahn Rhrissorrakrai, Lily S Cheung, Trudi Sch\"upbach, Stanislav Y Shvartsman, Jayme M Johnson, Meng Jin, Daniel J Lewa, Danny Ben-Zvi, Ben-Zion Shilo, others
0