María Rodríguez Martínez  María Rodríguez Martínez photo       

contact information

Research Staff Member
Zurich Research Laboratory, Zurich, Switzerland
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Professional Associations

Professional Associations:  International Society for Computation Biology


2017

Inferring clonal composition from multiple tumor biopsies
M. Manica*, P. Chouvarine*, R. Mathis*, U. Wagner, K. Oehl, K. Saba, L. De Vargas Roditi, A. N Pati, M. Rodriguez Martinez*, P. J. Wild*, P. Sumazin*
arXiv preprint arXiv:1701.07940, 2017

High-throughput validation of ceRNA regulatory networks
Hua-Sheng Chiu, Maria Rodriguez Martinez, Mukesh Bansal, Aravind Subramanian, Todd R Golub, Xuerui Yang, Pavel Sumazin, and Andrea Califano.
BMC genomics 18(1), 418, BioMed Central, 2017


2016

Depletion of FOXM1 via MET targeting underlies establishment of a DNA damage-induced senescence program in gastric cancer
Paola Francica, Lluis Nisa, Daniel M Aebersold, Rupert Langer, Friedhelm Bladt, Andree Blaukat, Deborah Stroka, Maria Rodriguez Martinez, Yitzhak Zimmer and Michaela Medova
Clinical Cancer Research, clincanres--2987, AACR, 2016

Marginalized Continuous Time Bayesian Networks for Network Reconstruction from Incomplete Observations
Lukas Studer, Loic Pauleve, Christoph Zechner, Matthias Reumann, Maria Rodriguez Martinez and Heinz Koeppl
AAAI Conference on Artificial Intelligence, 2016


2015

Elucidating compound mechanism of action by network perturbation analysis
Jung Hoon Woo, Yishai Shimoni, Wan Seok Yang, Prem Subramaniam, Archana Iyer, Paola Nicoletti, Maria Rodriguez Martinez, Gonzalo Lopez, Michela Mattioli, Ronald Realubit, Charles Karan, Brent R. Stockwell, Mukesh Bansal and Andrea Califano
Cell 162(2), 441-451, 2015


2014

Observational Consequences of a Landscape: Epilogue
Ben Freivogel, Matthew Kleban, Maria Rodriguez Martinez, Leonard Susskind
Cosmology and Nongalactic Astrophysics, 2014


2013

Highly conserved ceRNA regulatory interactions cooperate with genomic variability to modulate drivers of tumorigenesis
Hua-Sheng Chiu, Maria Rodriguez Martinez, David Llobet-Navas, Aravind Subramanian, Archana Iyer, Yishai Shimoni, Mukesh Bansal, Todd R. Golub, Jose Silva, Xuerui Yang, Pavel Sumazin, Andrea Califano.
Proceedings: AACR 104th Annual Meeting, 2013

GWAS next generation: identifying mechanisms of action in association studies
María Rodríguez Martínez, Paola Nicoletti, Gonzalo López, Mukesh Bansal, Yishai Shimoni, Andrea Califano
Regulatory Genomics Special Interest Group (RegGen SIG) Program, 2013


2012

Quantitative modeling of the terminal differentiation of B cells and mechanisms of lymphomagenesis
M. Rodriguez Martinez, A. Corradin, U. Klein, M.J. Alvarez, G.M. Toffolo, B. di Camillo, A. Califano, G.A. Stolovitzky
Proceedings of the National Academy of Sciences 109(7), 2672-2677, 2012


2010

Quorum percolation in living neural networks
Or Cohen, Anna Keselman, Elisha Moses, Maria Rodriguez Martinez, Jordi Soriano, Tsvi Tlusty
EPL (Europhysics Letters) 89(1), 18008, IOP Publishing, 2010

Messenger RNA fluctuations and regulatory RNAs shape the dynamics of a negative feedback loop
María Rodríguez Martínez, Jordi Soriano, Tsvi Tlusty, Yitzhak Pilpel, Itay Furman
Physical Review E 81(3), 031924, APS, 2010


2008

Development of input connections in neural cultures
Jordi Soriano, María Rodríguez Martínez, Tsvi Tlusty, Elisha Moses
Proceedings of the National Academy of Sciences 105(37), 13758-13763, 2008

Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation
Ophir Shalem, Orna Dahan, Michal Levo, Maria Rodriguez Martinez, Itay Furman, Eran Segal, Yitzhak Pilpel
Molecular Systems Biology 4(1), 223, 2008


2007

Input-output robustness in simple bacterial signaling systems
Guy Shinar, Ron Milo, María Rodríguez Martínez, Uri Alon
Proceedings of the National Academy of Sciences 104(50), 19931-19935, 2007


2006

Observational consequences of a landscape
Ben Freivogel, Matthew Kleban, María Rodríguez Martínez, Leonard Susskind
Journal of High Energy Physics0603, 039, 2006

Constraining Lorentz violations with gamma-ray bursts
María Rodríguez Martínez, Tsvi Piran
Journal of Cosmology and Astroparticle Physics604, 6, 2006

Gamma-ray bursts and new physics
Tsvi Piran, Dafne Guetta, María Rodríguez Martínez
Progress of Theoretical Physics Supplement163, 23-37, 2006

GRB 051221A and tests of Lorentz symmetry
María Rodríguez Martínez, Tsvi Piran, Yonatan Oren
Journal of Cosmology and Astroparticle Physics0605, 017, 2006


2003

Defining perturbations on submanifolds
Karim A Malik, María Rodríguez-Martínez, David Langlois
Physical Review D 68(12), 123517, APS, 2003


2002

Fluctuating brane in a dilatonic bulk
Philippe Brax, David Langlois, Maria Rodriguez-Martinez
Phys.Rev. D67, 104022, 2002

Brane Cosmology with a Bulk Scalar Field
M Rodriguez-Martinez
International Journal of Modern Physics A 17(20), 2774-2774, World Scientific, 2002

Cosmology of a brane radiating gravitons into the extra dimension
David Langlois, Lorenzo Sorbo, Maria Rodriguez-Martinez
Physical Review Letters 89(17), 171301, APS, 2002


2001

Brane cosmology with a bulk scalar field
David Langlois and María Rodríguez-Martínez
Phys. Rev. D64, 123507, 2001


Year Unknown

GWAS next generation: identifying mechanisms of action in association studies.
Mart{'i}nez, Mar{'i}a Rodr{'i}guez and Nicoletti, Paola and L{'o}pez, Gonzalo and Bansal, Mukesh and Shimoni, Yishai and Califano, Andrea
Regulatory Genomics Special Interest Group (RegGen SIG) Program July 20, 2013