Laxmi Parida  Laxmi Parida photo       

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Distinguished RSM & Manager, Computational Genomics Group
Thomas J. Watson Research Center, Yorktown Heights, NY USA
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Professional Associations

Professional Associations:  ACM  |  International Society for Computational Biology  |  Society for Industrial and Applied Mathematics

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More information:  Group page


Please use the United States Patent & Trademark Office (USPTO) databases to download full text of the following.

  1. Methods and systems for reconstructing genomic common ancestors, US Patent 8700334, April 15, 2014.
  2. LOSSLESS COMPRESSION OF THE ENUMERATION SPACE OF FOUNDER LINE CROSSES U.S. Serial No. 14/014,635 ((the continuation application: 14/049,830), August 30, 2013.
  3. Tunneling Junction To Distinguish Targeted DNA Segment, U.S. Serial No. 13930578, June 28, 2013.
  4. VISUAL ANALYSIS OF A PROTEIN FOLDING PROCESS, US Patent 8423339, April 16, 2013.
  5. TMRMR: Transductive Feature Selection based on Max-Relevance and Min-Redundancy for High Dimensional Data Regression Problems, U.S. Serial No. 13/745,930, Jan 21, 2013.
  6. DMRMR: Dynamic Programming Algorithm to Improve the Efficiency of mRMR, U.S. Serial No. 13/745,923, Jan 21, 2013.
  7. EMRMR: Epistasis Model based on mRMR for Phenotype Prediction, U.S. Serial No. 13/745,914, Jan 21, 2013.
  8. HMRMR: A Hill Climbing Algorithm to Improve the Accuracy of mRMR, U.S. Serial No. 13/745,909, Jan 21, 2013.
  9. TLASSO: Transductive Lasso for High Dimensional Data Regression Problems, U.S. Serial No. 13/745,301, Jan 18, 2013.
  10. METHOD AND SYSTEM FOR IDENTIFYING PARTIAL ORDER PATTERNS IN SEQUENCES OF DATA, US Patent 8355878, Jan 15, 2013.
  11. EFFICIENT SORTING OF LARGE DIMENSIONAL DATA, U.S. Serial No. US 13/711227, Dec 11, 2012.
  12. Stable Genes in Comparative Transcriptomics, U.S. Serial No. US 13/713970, Dec 13, 2012.
  13. PRECISE SIMULATION OF PROGENY DERIVED FROM RECOMBINING PARENTS, U.S. Serial No. 13/675,496 , Nov 13, 2012.
  14. QUANTITATIVE MODELS OF MULTI-ALLELIC MULTI-LOCI INTERACTIONS, U.S. Serial No. 13/675,475, Nov 13, 2012.
  15. EXACT HAPLOTYPE RECONSTRUCTION OF F2 POPULATIONS, U.S. Serial No. 13/529,476, June 21, 2012.
  16. SAMPLING THE SPACE OF ANCESTRAL RECOMBINATION GRAPHS, U.S. Serial No. 13/169,824, June 27, 2011.
  17. RANK NORMALIZATION FOR DIFFERENTIAL EXPRESSION ANALYSIS OF TRANSCRIPTOME SEQUENCING DATA, U.S. Serial No. 13/459529, April 30, 2012.
  18. Significance Measure of Structured Clusters, US Patent 7925447, April 12, 2011.
  19. SYSTEM AND METHOD FOR IDENTIFYING A GAPPED PERMUTATION PATTERN, US Patent 7917305, March 29, 2011
  20. METHOD AND SYSTEM FOR COMPARATIVE GENOMICS, US Patent 7881874, Feb 1, 2011
  21. Assembly Error Detection, U.S. Serial No. 13/010949, Jan 21, 2011
  22. Methods and Systems for conservative extraction of over-represented extensible motifs, US Patent 7,865,313, Jan 4, 2011
  23. Pattern Discovery Techniques for Determining Maximal Irredundant and Redundant Motifs, USPTO 20100057373, March 04, 2010.
  24. Topological Motif Discovery, US Patent 7,558,768, July 7, 2009.
  25. METHOD FOR RECONSTRUCTING EVOLUTIONARY DATA, USPTO 20090132584, May 21, 2009.
  26. Apparatus, system and method for data compression using irredundant patterns, US Patent 7,479,905, Jan 20, 2009.
  27. OBJECT CLASSIFICATION USING AN OPTIMIZED BOOLEAN EXPRESSION, U.S. Patent 7428515, Sep 23, 2008.
  28. METHOD AND APPARATUS FOR DETECTING CONSENSUS MOTIFS IN DATA SEQUENCES, USPTO 20080167850, July 10, 2008.
  29. Method and system for clustering objects and finding prime redescriptors for the clusters, USPTO 0070213957, Sept 13, 2007.
  30. Method and structure for lossy compression of continuous data with extensible motifs, U.S. Patent 7259701, August 21, 2007.
  31. System and Method for Encoding and Detecting Extensible Patterns, U.S. Patent 7203680, April 10, 2007.
  32. Method and system for protein folding trajectory analysis using patterned clusters, USPTO 20060069515, March 30, 2006.
  33. Fuzzy bi-clusters on multi-feature data, USPTO 20060184459, Aug 17, 2006.
  34. Discovering Permutation Patterns, USPTO 20050060321, March 17, 2005.
  35. Methods and Apparatus for Performing Pattern Discovery and Generation with respect to Data Sequences, U.S. Patent 6571230, May 27, 2003.
  36. Multiple Sequence Alignment System and Method, U.S. Patent 6205444B1, March 20, 2001.