Topology and redescriptions detect multiple alternative biological pathways from clinical phenotypes
- Negin Karisani
- Daniel E. Platt
- et al.
- 2022
- Experimental Biology and Medicine
Publications
7 results for Saugata Basu
Signal enrichment with strain-level resolution in metagenomes using topological data analysis
- Aldo Guzmán-Sáenz
- Niina Haiminen
- et al.
- 2019
- BMC Genomics
Essential simplices in persistent homology and subtle admixture detection
- Saugata Basu
- Filippo Utro
- et al.
- 2018
- WABI 2018
Spectral sequences, exact couples and persistent homology of filtrations
- Saugata Basu
- Laxmi Parida
- 2017
- Expositiones Mathematicae
Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis
- Daniel Platt
- Saugata Basu
- et al.
- 2016
- BMC Systems Biology
Complexity of computing semi-algebraic descriptions of the connected components of a semi-algebraic set
- Saugata Basu
- R. Pollack
- et al.
- 1998
- ISSAC 1998
Improved algorithm for quantifier elimination over real closed fields
- Saugata Basu
- 1997
- FOCS 1997