James R. Kozloski  James R. Kozloski photo         

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Manager, Multiscale Systems Biology and Modeling—Heart, Brain, and Spinal Cord, Research Staff Member, Member IBM Academy of Technology, Master Inventor
Thomas J. Watson Research Center, Yorktown Heights, NY USA



Striatal network modeling in Huntingtons Disease
Adam Ponzi, Scott J. Barton, Kendra D. Bunner, Claudia Rangel-Barajas, Emily S. Zhang, Benjamin R. Miller, George V. Rebec, James Kozloski
PLOS Computational Biology 16(4), 2020

Multimodal Dynamic Brain Connectivity Analysis Based on Graph Signal Processing for Former Athletes With History of Multiple Concussions
S. Sihag, Naze S, Taghdiri F, ... &, Tartaglia MC, Kozloski JR
IEEE Transactions on Signal and Information Processing over Networks6, 2020

Model order reduction for left ventricular mechanics via congruency training
Paolo Di Achille, Jaimit Parikh, Svyatoslav Khamzin, Olga Solovyova, James Kozloski, Viatcheslav Gurev
bioRxiv, 2020


Dimensions of control for subthreshold oscillations and spontaneous firing in dopamine neurons
Rumbell T and Kozloski J
PLOS Computational Biology 15(9), 1-34, Public Library of Science, 2019

GSP Analysis of Brain Imaging Data from Athletes with History of Multiple Concussions
Sihag S, Naze S, Taghdiri F, Tartaglia MC, Kozloski JR
IEEE GlobalSIP Conference, IEEE, 2019

Classification of TMS evoked potentials using ERP time signatures and SVM versus deep learning
Naze S, Caggiano V, Sun Y, Lucas MV, Etkin A, Kozloski J
IEEE EMBC Conference, IEEE, 2019

Global Sensitivity Analysis of Ventricular Myocyte Model-Derived Metrics for Proarrhythmic Risk Assessment
Jaimit Parikh, Paolo Di Achille, James Kozloski, Viatcheslav Gurev
Frontiers in Pharmacology10, 2019

Transient, Consequential Increases in Extracellular Potassium Ions Accompany Channelrhodopsin2 Excitation
J. Christopher Octeau, Mohitkumar R. Gangwani, Sushmita L. Allam, Duy Tran, Shuhan Huang, Tuan M. Hoang-Trong, Peyman Golshani, Timothy H. Rumbell, James R. Kozloski, Baljit S. Khakh
Cell Reports 27(8), 2019


Cortico-striatal cross-frequency coupling and gamma genesis disruptions in Huntington's disease mouse and computational models
Sebastien Naze, James Humble, Pengsheng Zheng, Scott Barton, Claudia Rangel-Barajas, George V. Rebec and James R. Kozloski
eNeuro 5(6), 2018


Dendritic spines modify action potential back-propagation in a multicompartment neuronal model
Trong, TM Hoang and Motley, SE and Wagner, J and Kerr, RR and Kozloski, J
IBM Journal of Research and Development 61(2/3), 11--1, IBM, 2017

Predicting cognitive states from wearable recordings of autonomic function
Webster, E and Sukaviriya, N and Chang, H-Y and Kozloski, J
IBM Journal of Research and Development 61(2/3), 2--1, IBM, 2017



Self-referential forces are sufficient to explain different dendritic morphologies
H Memelli, B Torben-Nielsen, J Kozloski
Frontiers in Neuroinformatics 7(1), Frontiers Media, 2013


The Computational Basis of Emotions and Implications for Cognitive Architectures
Biologically Inspired Cognitive Architectures 2011: Proceedings of the Second Annual Meeting of the BICA Society, pp. 269

An Ultrascalable Solution to Large-scale Neural Tissue Simulation
J. Kozloski, J. Wagner
Front Neuroinform5, 15, 2011

Automated reconstruction of neural tissue and the role of large-scale simulation
J. Kozloski
Neuroinformatics 9(2-3), 133--142, 2011


A theory of loop formation and elimination by spike timing-dependent plasticity
J. Kozloski, G. A. Cecchi
Front Neural Circuits4, 7, 2010


Interoperable Model Graph Simulator for High-Performance Computing
J Kozloski, M Eleftheriou, B Fitch, C Peck
IBM Research Reports RC24811(W0906-078), 2009


Network-related challenges and insights from neuroscience
C Peck, J Kozloski, G Cecchi, S Hill, F Schuermann, H Markram, R Rao
Bio-Inspired Computing and Communication, pp. 67--78, Springer, 2008

Efficient segmentation in multi-layer oscillatory networks
A Ravishankar Rao, G A Cecchi, C C Peck, J R Kozloski
Neural Networks, 2008, pp. 2966--2973

Identifying, tabulating, and analyzing contacts between branched neuron morphologies
J Kozloski, K Sfyrakis, S Hill, F Schuermann, C Peck, H Markram
IBM Journal of Research and Development 52(1/2), 43--55, IBM, 2008

Unsupervised segmentation with dynamical units
A R Rao, G A Cecchi, C C Peck, J R Kozloski
IEEE Transactions on Neural Networks 19(1), 168, IEEE, 2008


Emergence of Topographic Cortical Maps in a Parameterless Local Competition Network
A Rao, G Cecchi, C Peck, J Kozloski
Advances in Neural Networks, ISNN 20074492, 552--561, Springer

Topographic Infomax in a Neural Multigrid
J Kozloski, G Cecchi, C Peck, A Rao
Advances in Neural Networks, ISNN 20074492, 500--509, Springer


An optimization approach to achieve unsupervised segmentation and binding in a dynamical network
A R Rao, G A Cecchi, C C Peck, J R Kozloski
IEEE International Joint Conference on Neural Networks, 2006, pp. 4159--4166

Inference and segmentation in cortical processing
Y Liu, G A Cecchi, A R Rao, J Kozloski, C C Peck
Proceedings of SPIE, pp. 344--353, 2006

Translation invariance in a network of oscillatory units
A R Rao, G A Cecchi, C C Peck, J R Kozloski
Proceedings of SPIE, pp. 469--477, 2006


A Biologically Motivated Classifier that Preserves Implicit Relationship Information in Layered Networks
C C P J K Guillermo, A Cecchi, A R Rao
Adaptive and natural computing algorithms: proceedings of the international conference in Coimbra, Portugal, 2005, pp. 82, Springer


A proposed method for recording intracellular signals using errors in intracellular biopolymer synthesis
J Kozloski
Society for Neuroscience, 2004


Simulation infrastructure for modeling large scale neural systems
C Peck, J Kozloski, A Rao, G Cecchi
Computational Science, ICCS, 713--713, Springer, 2003



Stereotyped position of local synaptic targets in neocortex
J Kozloski, F Hamzei-Sichani, R Yuste
Science 293(5531), 868, AAAS, 2001


Optical probing of neuronal circuits with calcium indicators
Z A Peterlin, J Kozloski, B Q Mao, A Tsiola, R Yuste
Proceedings of the National Academy of Sciences 97(7), 3619, 2000



Functional neuroanatomy of auditory pathways in the sound-producing fish Pollimyrus
J Kozloski, J D Crawford
The Journal of Comparative Neurology 401(2), 227--252, 1998


Linkage disequilibrium between the FES, D15S127, and BLM loci in Ashkenazi Jews with Bloom syndrome.
NA Ellis, AM Roe, J Kozloski, M Proytcheva, C Falk, J German
American Journal of Human Genetics 55(3), 453, 1994